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系统发生基因组分析揭示了沿广泛分布的淡水虾 Potimirim brasiliana(十足目,长臂虾科)种群之间的基因流动。

Phylogenomic analyses reveals gene flow between populations of the freshwater shrimp Potimirim brasiliana (Caridea, Atyidae) along its wide distribution.

机构信息

University of São Paulo (USP), Laboratory of Bioecology and Crustacean Systematics (LBSC), Department of Biology, Faculty of Philosophy, Science and Letters at Ribeirão Preto (FFCLRP), Av. Bandeirantes 3900, Monte Alegre, 14040-901 Ribeirão Preto, SP, Brazil.

出版信息

An Acad Bras Cienc. 2021 Mar 15;93(2):e20190384. doi: 10.1590/0001-3765202120190384. eCollection 2021.

DOI:10.1590/0001-3765202120190384
PMID:33729377
Abstract

Potimirim is one of the 40 genera of Atyidae restricted to America, which occurs in coastal freshwater habitats and questions about population status and variability have been emerging. Potimirim brasiliana occurs in Brazil from the northeastern to southeastern region. In order to evaluate the hypothesis of genetic structure among populations, we performed molecular analyses with specimens from all known limit of distribution of the species. The molecular markers used were COI and 28S. Phylogenetic trees were obtained by maximum likelihood and Bayesian analyses, and a haplotype network was obtained based only on COI. We found clear separation between P. brasiliana, P. potimirim, P. glabra and Potimirim sp 2. No pattern of structuration was found among P. brasiliana, but the haplotype network showed geographic pattern of structuration for the congener P. potimirim. The lack of genetic structuration among P. brasiliana can be explained by its life cycle that requires brackish water to complete their larval development. The larvae and juvenile in contact with these habitats can spread through oceanic currents, especially in higher rainfall seasons, maintaining the gene flow. The explanation for the geographical pattern found among P. potimirim is still missing and aspects about its lifecycle and larval development should be investigated.

摘要

波蒂米林是 40 种局限于美洲的脂蟾科鱼类之一,分布于沿海水域的淡水栖息地,有关其种群状况和变异性的问题不断出现。巴西波蒂米林分布于巴西东北部到东南部地区。为了评估种群间遗传结构的假设,我们对来自该物种所有已知分布范围的标本进行了分子分析。使用的分子标记是 COI 和 28S。通过最大似然法和贝叶斯分析获得了系统发育树,仅基于 COI 获得了单倍型网络图。我们发现巴西波蒂米林、波蒂米林、光滑波蒂米林和 Potimirim sp2 之间有明显的分离。在巴西波蒂米林中没有发现结构模式,但单倍型网络图显示了同属种波蒂米林的地理结构模式。巴西波蒂米林中没有遗传结构可以用其生命周期来解释,该生命周期需要半咸水来完成其幼虫发育。接触这些栖息地的幼虫和幼鱼可以通过海洋洋流传播,尤其是在降雨量较高的季节,从而保持基因流。关于波蒂米林中发现的地理模式的解释仍然缺失,应该调查其生命周期和幼虫发育的方面。

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