IEEE Trans Med Imaging. 2021 Jul;40(7):1827-1837. doi: 10.1109/TMI.2021.3066781. Epub 2021 Jun 30.
Standard parameter estimation from vascular magnetic resonance fingerprinting (MRF) data is based on matching the MRF signals to their best counterparts in a grid of coupled simulated signals and parameters, referred to as a dictionary. To reach a good accuracy, the matching requires an informative dictionary whose cost, in terms of design, storage and exploration, is rapidly prohibitive for even moderate numbers of parameters. In this work, we propose an alternative dictionary-based statistical learning (DB-SL) approach made of three steps: 1) a quasi-random sampling strategy to produce efficiently an informative dictionary, 2) an inverse statistical regression model to learn from the dictionary a correspondence between fingerprints and parameters, and 3) the use of this mapping to provide both parameter estimates and their confidence indices. The proposed DB-SL approach is compared to both the standard dictionary-based matching (DBM) method and to a dictionary-based deep learning (DB-DL) method. Performance is illustrated first on synthetic signals including scalable and standard MRF signals with spatial undersampling noise. Then, vascular MRF signals are considered both through simulations and real data acquired in tumor bearing rats. Overall, the two learning methods yield more accurate parameter estimates than matching and to a range not limited to the dictionary boundaries. DB-SL in particular resists to higher noise levels and provides in addition confidence indices on the estimates at no additional cost. DB-SL appears as a promising method to reduce simulation needs and computational requirements, while modeling sources of uncertainty and providing both accurate and interpretable results.
基于网格中模拟信号及其参数的最佳匹配来进行标准参数估计是磁共振指纹(MRF)数据分析的常用方法,这些模拟信号及其参数被称为字典。为了达到良好的准确性,这种匹配需要一个信息量丰富的字典,但设计、存储和探索该字典的成本会随着参数数量的增加而迅速增加,即使是中等数量的参数也难以负担。在这项工作中,我们提出了一种基于字典的替代统计学习(DB-SL)方法,它由三个步骤组成:1)准随机采样策略,可有效生成信息量丰富的字典;2)逆统计回归模型,用于从字典中学习指纹和参数之间的对应关系;3)使用这种映射来提供参数估计及其置信指数。将提出的 DB-SL 方法与标准基于字典的匹配(DBM)方法和基于字典的深度学习(DB-DL)方法进行了比较。该方法首先在包括具有空间欠采样噪声的可扩展和标准 MRF 信号的合成信号上进行了性能验证,然后在肿瘤大鼠的模拟和真实数据上进行了血管 MRF 信号的验证。总的来说,这两种学习方法比匹配方法提供了更准确的参数估计,而且范围不仅限于字典边界。DB-SL 特别能够抵抗更高的噪声水平,并且可以在不增加额外成本的情况下提供估计的置信指数。DB-SL 是一种很有前途的方法,可以减少模拟需求和计算要求,同时模拟不确定性的来源,并提供准确且可解释的结果。