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鉴定水稻基因组中的新型 SUMO 家族基因。

Characterization of novel SUMO family genes in the rice genome.

机构信息

Department of Biological Science and Technology, Tokyo University of Science.

Department of Bioscience, School of Science and Technology, Kwansei Gakuin University.

出版信息

Genes Genet Syst. 2021 May 8;96(1):25-32. doi: 10.1266/ggs.20-00034. Epub 2021 Mar 17.

Abstract

Small ubiquitin-related modifier (SUMO) is a post-translational modification factor composed of about 100 amino acid residues. Most plant species express a family of SUMO isoforms. We found three novel homologs of rice (Oryza sativa L.) SUMO genes, OsSUMO4, OsSUMO5 and OsSUMO6, in addition to the known SUMO genes OsSUMO1-OsSUMO3. Phylogenetic tree analysis revealed that rice SUMO genes have diverged considerably during their evolution. All six of these SUMO genes complemented the phenotype of the SUMO-deficient pmt3Δ mutant of fission yeast. Among the amino acid sequences of rice SUMO proteins, consensus motifs (ΨKXE/D) of the SUMO acceptor site were found in OsSUMO3, OsSUMO4, OsSUMO5 and OsSUMO6. The heat shock protein HSF7 is known to be SUMOylated in Arabidopsis thaliana. SUMOylation using a bacterial expression system revealed that the rice HSF7 homolog was modified by the six rice SUMOs, and further suggested that OsSUMO1, OsSUMO3, OsSUMO4 and OsSUMO6 are involved in its multiple SUMOylation.

摘要

小泛素相关修饰物 (SUMO) 是一种由大约 100 个氨基酸残基组成的翻译后修饰因子。大多数植物物种表达一系列 SUMO 同工型。除了已知的 SUMO 基因 OsSUMO1-OsSUMO3 之外,我们还在水稻 (Oryza sativa L.) 中发现了三个新的 SUMO 基因的同源物,OsSUMO4、OsSUMO5 和 OsSUMO6。系统发育树分析表明,在进化过程中,水稻 SUMO 基因已经有了很大的分化。这六个 SUMO 基因都可以互补裂殖酵母 SUMO 缺陷型 pmt3Δ 突变体的表型。在水稻 SUMO 蛋白的氨基酸序列中,在 OsSUMO3、OsSUMO4、OsSUMO5 和 OsSUMO6 中发现了 SUMO 受体位点的保守基序 (ΨKXE/D)。拟南芥中的热休克蛋白 HSF7 已知被 SUMO 化。使用细菌表达系统进行 SUMOylation 表明,水稻 HSF7 同源物被六种水稻 SUMO 修饰,进一步表明 OsSUMO1、OsSUMO3、OsSUMO4 和 OsSUMO6 参与了其多 SUMOylation。

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