Department of Molecular and Cell Biology, University of Connecticut, Storrs, Connecticut, USA.
Department of Molecular Biology and Biochemistry, Molecular Biophysics Program, Wesleyan University, Middletown, Connecticut, USA.
Protein Sci. 2021 May;30(5):990-1005. doi: 10.1002/pro.4066. Epub 2021 Mar 30.
The C-terminal domain of Bacillus cereus hemolysin II (HlyIIC), stabilizes the trans-membrane-pore formed by the HlyII toxin and may aid in target cell recognition. Initial efforts to determine the NMR structure of HlyIIC were hampered by cis/trans isomerization about the single proline at position 405 that leads to doubling of NMR resonances. We used the mutant P405M-HlyIIC that eliminates the cis proline to determine the NMR structure of the domain, which revealed a novel fold. Here, we extend earlier studies to the NMR structure determination of the cis and trans states of WT-HlyIIC that exist simultaneously in solution. The primary structural differences between the cis and trans states are in the loop that contains P405, and structurally adjacent loops. Thermodynamic linkage analysis shows that at 25 C the cis proline, which already has a large fraction of 20% in the unfolded protein, increases to 50% in the folded state due to coupling with the global stability of the domain. The P405M or P405A substitutions eliminate heterogeneity due to proline isomerization but lead to the formation of a new dimeric species. The NMR structure of the dimer shows that it is formed through domain-swapping of strand β5, the last segment of secondary structure following P405. The presence of P405 in WT-HlyIIC strongly disfavors the dimer compared to the P405M-HlyIIC or P405A-HlyIIC mutants. The WT proline may thus act as a "gatekeeper," warding off aggregative misfolding.
苏云金芽孢杆菌溶血素 II(HlyIIC)的 C 端结构域稳定了 HlyII 毒素形成的跨膜孔,并可能有助于靶细胞的识别。最初,我们试图确定 HlyIIC 的 NMR 结构,但由于第 405 位脯氨酸的顺式/反式异构化,导致 NMR 共振加倍,这一尝试受到了阻碍。我们使用消除了顺式脯氨酸的突变体 P405M-HlyIIC 来确定该结构域的 NMR 结构,结果揭示了一个新的折叠。在这里,我们扩展了之前的研究,确定了同时存在于溶液中的 WT-HlyIIC 的顺式和反式状态的 NMR 结构。顺式和反式状态之间的主要结构差异在于包含 P405 的环和结构相邻的环。热力学连接分析表明,在 25°C 时,顺式脯氨酸在未折叠蛋白中已经有 20%的比例处于顺式,由于与结构域的整体稳定性相耦合,在折叠状态下增加到 50%。P405M 或 P405A 取代消除了由于脯氨酸异构化引起的异质性,但导致形成了新的二聚体。二聚体的 NMR 结构表明,它是通过 P405 之后的二级结构最后一段β5 链的结构域交换形成的。与 P405M-HlyIIC 或 P405A-HlyIIC 突变体相比,WT-HlyIIC 中 P405 的存在强烈不利于二聚体的形成。因此,WT 脯氨酸可能充当“守门员”,防止聚集性错误折叠。