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历史偶然性导致 lac 操纵子适应性表达的分歧。

Historical Contingency Causes Divergence in Adaptive Expression of the lac Operon.

机构信息

Department of Biology and Biochemistry, University of Houston, Houston, TX, USA.

School of Natural and Computational Sciences, Massey University, Auckland, New Zealand.

出版信息

Mol Biol Evol. 2021 Jun 25;38(7):2869-2879. doi: 10.1093/molbev/msab077.

Abstract

Populations of Escherichia coli selected in constant and fluctuating environments containing lactose often adapt by substituting mutations in the lacI repressor that cause constitutive expression of the lac operon. These mutations occur at a high rate and provide a significant benefit. Despite this, eight of 24 populations evolved for 8,000 generations in environments containing lactose contained no detectable repressor mutations. We report here on the basis of this observation. We find that, given relevant mutation rates, repressor mutations are expected to have fixed in all evolved populations if they had maintained the same fitness effect they confer when introduced to the ancestor. In fact, reconstruction experiments demonstrate that repressor mutations have become neutral or deleterious in those populations in which they were not detectable. Populations not fixing repressor mutations nevertheless reached the same fitness as those that did fix them, indicating that they followed an alternative evolutionary path that made redundant the potential benefit of the repressor mutation, but involved unique mutations of equivalent benefit. We identify a mutation occurring in the promoter region of the uspB gene as a candidate for influencing the selective choice between these paths. Our results detail an example of historical contingency leading to divergent evolutionary outcomes.

摘要

在含有乳糖的恒定和波动环境中选择的大肠杆菌种群,通常通过替换 lacI 阻遏物中的突变来适应,这些突变导致 lac 操纵子的组成型表达。这些突变发生的频率很高,提供了显著的益处。尽管如此,在含有乳糖的环境中进化了 8000 代的 24 个种群中,没有检测到可检测的阻遏物突变。我们在此报告这一观察结果。我们发现,如果阻遏物突变保持其引入祖先时的相同适应度效应,那么在所有进化种群中,这些突变应该已经固定下来。事实上,重建实验表明,在那些无法检测到阻遏物突变的种群中,这些突变已经变得中性或有害。没有固定阻遏物突变的种群仍然达到了与那些固定突变的种群相同的适应度,这表明它们遵循了一种替代的进化途径,这种途径使阻遏物突变的潜在益处变得多余,但涉及到同等益处的独特突变。我们确定了发生在 uspB 基因启动子区域的一个突变,作为影响这两条途径之间选择性选择的候选因素。我们的结果详细描述了历史偶然性导致不同进化结果的一个例子。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/882a/8233506/f9f3b518b23f/msab077f1.jpg

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