McMahon Nathan P, Solanki Allison, Wang Lei G, Montaño Antonio R, Jones Jocelyn A, Samkoe Kimberley S, Tichauer Kenneth M, Gibbs Summer L
Biomedical Engineering Department, Oregon Health & Science University, Portland, OR, USA.
Thayer School of Engineering at Dartmouth College, Dartmouth College, Hanover, NH, USA.
Mol Imaging Biol. 2021 Oct;23(5):650-664. doi: 10.1007/s11307-021-01589-x. Epub 2021 Mar 9.
Personalized medicine has largely failed to produce curative therapies in advanced cancer patients. Evaluation of in situ drug target availability (DTA) concomitant with local protein expression is critical to an accurate assessment of therapeutic efficacy, but tools capable of both are currently lacking.
We developed and optimized a fluorescence imaging platform termed TRIPODD (Therapeutic Response Imaging through Proteomic and Optical Drug Distribution), resulting in the only methodology capable of simultaneous quantification of single-cell DTA and protein expression with preserved spatial context within a tumor. Using TRIPODD, we demonstrate the feasibility of combining two complementary fluorescence imaging techniques, intracellular paired agent imaging (iPAI) and cyclic immunofluorescence (cyCIF), conducted with oligonucleotide-conjugated antibodies (Ab-oligos) on tissue samples.
We successfully performed sequential imaging on a single tissue section of iPAI to capture single-cell DTA and local protein expression heterogeneity using Ab-oligo cyCIF. Fluorescence imaging data acquisition was followed by spatial registration resulting in high dimensional data correlating DTA to protein expression at the single-cell level where uptake of a targeted probe alone was not well correlated to protein expression.
Herein, we demonstrated the utility of TRIPODD as a powerful imaging platform capable of interpreting tumor heterogeneity for a mechanistic understanding of therapeutic response and resistance through quantification of drug target availability and proteomic response with preserved spatial context at single-cell resolution.
个性化医疗在晚期癌症患者中很大程度上未能产生治愈性疗法。评估原位药物靶点可用性(DTA)并结合局部蛋白质表达对于准确评估治疗效果至关重要,但目前缺乏能够同时做到这两点的工具。
我们开发并优化了一个名为TRIPODD(通过蛋白质组学和光学药物分布进行治疗反应成像)的荧光成像平台,这是唯一一种能够在肿瘤内保留空间背景的情况下同时对单细胞DTA和蛋白质表达进行定量的方法。使用TRIPODD,我们展示了将两种互补的荧光成像技术,即细胞内配对试剂成像(iPAI)和循环免疫荧光(cyCIF),与寡核苷酸偶联抗体(Ab-oligos)一起应用于组织样本的可行性。
我们成功地在iPAI的单个组织切片上进行了连续成像,以使用Ab-oligo cyCIF捕获单细胞DTA和局部蛋白质表达异质性。荧光成像数据采集之后进行空间配准,从而得到在单细胞水平上使DTA与蛋白质表达相关联的高维数据,而仅靶向探针的摄取与蛋白质表达并无良好关联。
在此,我们证明了TRIPODD作为一个强大的成像平台的实用性,它能够通过在单细胞分辨率下保留空间背景对药物靶点可用性和蛋白质组反应进行定量,来解释肿瘤异质性,从而对治疗反应和耐药性有一个机制上的理解。