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产超广谱β-内酰胺酶肺炎克雷伯菌在一所大学医院的流行特征:分子特征、流行克隆的传播及交叉传播的评估。

ESBL-producing Klebsiella pneumoniae in a University hospital: Molecular features, diffusion of epidemic clones and evaluation of cross-transmission.

机构信息

Hygiène Hospitalière, Centre Hospitalier Universitaire, Besançon, France.

UMR-CNRS 6249 Chrono-environnement, Université de Bourgogne Franche-Comté, Besançon, France.

出版信息

PLoS One. 2021 Mar 24;16(3):e0247875. doi: 10.1371/journal.pone.0247875. eCollection 2021.

Abstract

The worldwide spread of Klebsiella pneumoniae producing extended-spectrum β-lactamase (ESBL-Kp) is a significant threat. Specifically, various pandemic clones of ESBL-Kp are involved in hospital outbreaks and caused serious infections. In that context, we assessed the phenotypic and molecular features of a collection of ESBL-Kp isolates in a French university hospital and evaluated the occurrence of potential cross-transmissions. Over a 2-year period (2017-2018), 204 non-duplicate isolates of ESBL-Kp were isolated from clinical (n = 118, 57.8%) or screening (n = 86, 42.2%) sample cultures. These isolates were predominantly resistant to cotrimoxazole (88.8%) and ofloxacin (82.8%) but remained susceptible to imipenem (99.3%) and amikacin (93.8%). CTX-M-15 was the most frequent ESBL identified (83.6%). Multilocus sequence typing and pulse-field gel electrophoresis analysis showed an important genetic variability with 41 sequence types (ST) and 50 pulsotypes identified, and the over representation of the international epidemic clones ST307 and ST405. An epidemiological link attesting probable cross-transmission has been identified for 16 patients clustered in 4 groups during the study period. In conclusion, we showed here the dissemination of pandemic clones of ESBL-Kp in our hospital on a background of clonal diversity.

摘要

产超广谱β-内酰胺酶(ESBL-Kp)的肺炎克雷伯菌在全球范围内的传播是一个重大威胁。特别是,各种流行的 ESBL-Kp 克隆株参与了医院的暴发,并导致了严重的感染。在这种情况下,我们评估了法国一所大学医院收集的 ESBL-Kp 分离株的表型和分子特征,并评估了潜在的交叉传播的发生情况。在 2 年期间(2017-2018 年),从临床(n = 118,57.8%)或筛查(n = 86,42.2%)标本培养物中分离出了 204 株非重复的 ESBL-Kp 分离株。这些分离株主要对复方新诺明(88.8%)和氧氟沙星(82.8%)耐药,但对亚胺培南(99.3%)和阿米卡星(93.8%)仍敏感。CTX-M-15 是最常见的 ESBL 型(83.6%)。多位点序列分型和脉冲场凝胶电泳分析显示出重要的遗传变异性,共鉴定出 41 个序列型(ST)和 50 个脉冲型,国际流行克隆株 ST307 和 ST405 占比过高。在研究期间,有 16 名患者聚类为 4 个组,证明存在可能的交叉传播的流行病学联系。总之,我们在这里显示了流行的 ESBL-Kp 克隆株在我们医院的传播,同时存在克隆多样性的背景。

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