华北野生变种的叶绿体基因组序列。
Chloroplast genome sequence of the wild Mill. var from North China.
作者信息
Zhang Yuping, Hu Guanglong, Mao Weitao, Dong Ningguang, Chen Bo, Pan Qinghua
机构信息
Beijing Academy of Forestry and Pomology Sciences, Beijing, China.
Hubei Key Laboratory of Quality Control of Characteristic Fruits and Vegetables, College of Life Science and Technology, Hubei Engineering University, Xiaogan City, China.
出版信息
Mitochondrial DNA B Resour. 2021 Mar 1;6(2):666-667. doi: 10.1080/23802359.2021.1878962.
In this study, the complete chloroplast (cp) genome sequence of Mill. var was mapped and determined based on Illumina sequencing data. The complete cp genome is 161,606 bp and contains a pair of inverted repeat regions of 26,479 bp each, a large single-copy region of 89,292 bp, and a small single-copy region of 19,356 bp. It harbors 112 unique genes, including 78 protein-coding genes, 4 ribosomal RNA genes, and 30 transfer RNA genes. Phylogenetic analysis based on cp genomes indicates that the cp genome of wild Mill. var. is similar to that of cultivated and closely related to that of of the family
在本研究中，基于Illumina测序数据绘制并确定了Mill. var的完整叶绿体（cp）基因组序列。完整的cp基因组为161,606 bp，包含一对各为26,479 bp的反向重复区域、一个89,292 bp的大单拷贝区域和一个19,356 bp的小单拷贝区域。它包含112个独特基因，包括78个蛋白质编码基因、4个核糖体RNA基因和30个转运RNA基因。基于cp基因组的系统发育分析表明，野生Mill. var.的cp基因组与栽培种的相似，且与该科的的cp基因组密切相关。
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