Institute of Infection, Veterinary and Ecological Sciences, Faculty of Health and Life Sciences, University of Liverpool, Leahurst Campus, Chester High Road, Neston, Wirral CH64 7TE, UK.
Health Protection Research Unit in Emerging and Zoonotic Infections, University of Liverpool, 8 West Derby Street, Liverpool L69 7BE, UK.
Gigascience. 2021 Mar 25;10(3). doi: 10.1093/gigascience/giab021.
Rickettsia are intracellular bacteria best known as the causative agents of human and animal diseases. Although these medically important Rickettsia are often transmitted via haematophagous arthropods, other Rickettsia, such as those in the Torix group, appear to reside exclusively in invertebrates and protists with no secondary vertebrate host. Importantly, little is known about the diversity or host range of Torix group Rickettsia.
This study describes the serendipitous discovery of Rickettsia amplicons in the Barcode of Life Data System (BOLD), a sequence database specifically designed for the curation of mitochondrial DNA barcodes. Of 184,585 barcode sequences analysed, Rickettsia is observed in ∼0.41% of barcode submissions and is more likely to be found than Wolbachia (0.17%). The Torix group of Rickettsia are shown to account for 95% of all unintended amplifications from the genus. A further targeted PCR screen of 1,612 individuals from 169 terrestrial and aquatic invertebrate species identified mostly Torix strains and supports the "aquatic hot spot" hypothesis for Torix infection. Furthermore, the analysis of 1,341 SRA deposits indicates that Torix infections represent a significant proportion of all Rickettsia symbioses found in arthropod genome projects.
This study supports a previous hypothesis that suggests that Torix Rickettsia are overrepresented in aquatic insects. In addition, multiple methods reveal further putative hot spots of Torix Rickettsia infection, including in phloem-feeding bugs, parasitoid wasps, spiders, and vectors of disease. The unknown host effects and transmission strategies of these endosymbionts make these newly discovered associations important to inform future directions of investigation involving the understudied Torix Rickettsia.
立克次体是一种细胞内细菌,以引起人类和动物疾病的病原体而闻名。虽然这些医学上重要的立克次体通常通过吸血节肢动物传播,但其他立克次体,如 Torix 组,似乎只存在于无脊椎动物和原生动物中,没有二级脊椎动物宿主。重要的是,Torix 组立克次体的多样性或宿主范围知之甚少。
本研究描述了在生命条形码数据系统(BOLD)中偶然发现的立克次体扩增子,BOLD 是一个专门设计用于线粒体 DNA 条形码保存的序列数据库。在分析的 184585 个条形码序列中,发现立克次体存在于约 0.41%的条形码提交中,比沃尔巴克氏体(0.17%)更有可能被发现。Torix 组立克次体占所有属内非预期扩增的 95%。对 169 种陆地和水生无脊椎动物 1612 个个体的进一步靶向 PCR 筛选确定了大多数 Torix 株,并支持了 Torix 感染的“水生热点”假说。此外,对 1341 个 SRA 存款的分析表明,Torix 感染代表了在节肢动物基因组项目中发现的所有立克次体共生体的重要比例。
本研究支持了先前的假设,即 Torix 立克次体在水生昆虫中过度表达。此外,多种方法揭示了 Torix 立克次体感染的更多潜在热点,包括韧皮部取食昆虫、寄生蜂、蜘蛛和疾病传播媒介。这些内共生体未知的宿主效应和传播策略使得这些新发现的关联对于指导未来涉及研究较少的 Torix 立克次体的研究方向很重要。