Department of Stomatology, No. 215 Hospital of Shaanxi Nuclear Industry, Xianyang, 712000, Shaanxi, China.
Department of Stomatology, The Second Affiliated Hospital of Shaanxi University of Chinese Medicine, Xianyang, 712000, Shaanxi, China.
Biochem Genet. 2021 Oct;59(5):1260-1277. doi: 10.1007/s10528-021-10054-x. Epub 2021 Mar 26.
Long non-coding RNAs (lncRNAs) and miRNAs (microRNAs) are considered as key regulators of several biological processes, including dental development. In this study, we explored the lncRNAs and miRNAs which are involved in dental development.
Real-time PCR was performed to identify the candidate lncRNAs and miRNAs involved in dental development. Bioinformatics analysis and luciferase assay were carried out to establish the regulatory relationships between MALAT1, miR-203 and miR-200c in dental development.
Among all candidate lncRNAs, only MALAT1 was highly expressed in differentiated human dental pulp cells (hDPCs), and among all candidate miRNAs which are down-regulated in differentiated hDPCs, miR-203, and miR-200c are most decreased. Furthermore, MALAT1 was up-regulated while miR-203 and miR-200c were down-regulated in differentiated hDPCs in a time-dependent manner. MiR-203 and miR-200c were proved to bind to MALAT1. Moreover, BMI1 was identified as a target gene of miR-203 or miR-200c, and BMI1 was time-dependently decreased in hDPCs cultured with odontogenic medium. On the contrary, dentin sialophosphoprotein (DSPP), dentin matrix protein-1 (DMP-1), osteocalcin (OCN), and alkaline phosphatase (ALP), were time-dependently increased in hDPCs cultured with odontogenic medium. Finally, the overexpression of MALAT1 and the knockdown of miR-203/miR-200c both significantly increased the levels of BMI1, DSPP, DMP-1, OCN, and ALP, while the effect of knockdown of miR-203/miR-200c was much stronger than that of the overexpression of MALAT1.
Our results demonstrated that MALAT1 functions as a competing endogenous RNA of miR-203 and miR-200c and accordingly promotes BMI1 expression. Therefore, MALAT1 may serve as a biomarker for dental development.
长链非编码 RNA(lncRNA)和 microRNA(miRNA)被认为是包括牙齿发育在内的多个生物学过程的关键调控因子。在本研究中,我们探讨了参与牙齿发育的 lncRNA 和 miRNA。
采用实时 PCR 鉴定参与牙齿发育的候选 lncRNA 和 miRNA。通过生物信息学分析和荧光素酶报告基因实验,建立了 MALAT1、miR-203 和 miR-200c 在牙齿发育中的调控关系。
在所有候选 lncRNA 中,仅 MALAT1 在分化的人牙髓细胞(hDPC)中高度表达,而在所有下调的候选 miRNA 中,miR-203 和 miR-200c 下调最为显著。此外,MALAT1 在 hDPC 分化过程中呈时间依赖性上调,而 miR-203 和 miR-200c 呈时间依赖性下调。miR-203 和 miR-200c 被证实与 MALAT1 结合。此外,BMI1 被鉴定为 miR-203 或 miR-200c 的靶基因,在 hDPC 培养于成牙本质培养基中时,BMI1 呈时间依赖性下降。相反,牙本质涎磷蛋白(DSPP)、牙本质基质蛋白 1(DMP-1)、骨钙素(OCN)和碱性磷酸酶(ALP)在 hDPC 培养于成牙本质培养基中时呈时间依赖性增加。最后,MALAT1 的过表达和 miR-203/miR-200c 的敲低均显著增加了 BMI1、DSPP、DMP-1、OCN 和 ALP 的水平,而 miR-203/miR-200c 的敲低作用明显强于 MALAT1 的过表达。
我们的研究结果表明,MALAT1 作为 miR-203 和 miR-200c 的竞争性内源性 RNA 发挥作用,从而促进 BMI1 的表达。因此,MALAT1 可能作为牙齿发育的一个生物标志物。