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古菌海藻糖酶N端区域中疏水残基在其折叠过程中的作用评估。

Evaluation of the roles of hydrophobic residues in the N-terminal region of archaeal trehalase in its folding.

作者信息

Sakaguchi Masayoshi, Mukaeda Hinako, Kume Anna, Toyoda Yukiko, Sakoh Takumi, Kawakita Masao

机构信息

Department of Chemistry and Life Science, Kogakuin University, 2,665-1 Nakano-cho, Hachioji, Tokyo, 192-0015, Japan.

出版信息

Appl Microbiol Biotechnol. 2021 Apr;105(8):3181-3194. doi: 10.1007/s00253-021-11237-7. Epub 2021 Apr 1.

DOI:10.1007/s00253-021-11237-7
PMID:33791835
Abstract

Thermoplasma trehalase Tvn1315 is predicted to be composed of a β-sandwich domain (BD) and a catalytic domain (CD) based on the structure of the bacterial GH15 family glucoamylase (GA). Tvn1315 as well as Tvn1315 (Δ5), in which the 5 N-terminal amino acids are deleted, could be expressed in Escherichia coli as active enzymes, but deletion of 10 residues (Δ10) led to inclusion body formation. To further investigate the role of the N-terminal region of BD, we constructed five mutants of Δ5, in which each of the 5th to 10th residues of the N-terminus of Tvn1315 was mutated to Ala. Every mutant protein could be recovered in soluble form, but only a small fraction of the Y9A mutant was recovered in the soluble fraction. The Y9A mutant recovered in soluble form had similar specific activity to the other proteins. Subsequent mutation analysis at the 9th position of Tvn1315 in Δ5 revealed that aromatic as well as bulky hydrophobic residues could function properly, but residues with hydroxy groups impaired the solubility. Similar results were obtained with mutants based on untruncated Tvn1315. When the predicted BD, Δ5BD, Δ10BD, and BD mutants were expressed, the Δ10BD protein formed inclusion bodies, and the BD mutants behaved similarly to the Δ5 and full-length enzyme mutants. These results suggest that the hydrophobic region is involved in the solubilization of BD during the folding process. Taken together, these results indicate that the solubility of CD depends on BD folding. KEY POINTS: • N-terminal hydrophobic region of the BD is involved in the protein folding. • The N-terminal hydrophobic region of the BD is also involved in the BD folding. • BD is able to weakly interact with the insoluble β-glucan.

摘要

基于细菌GH15家族糖化酶(GA)的结构预测,嗜热栖热菌海藻糖酶Tvn1315由一个β-折叠结构域(BD)和一个催化结构域(CD)组成。Tvn1315以及缺失了5个N端氨基酸的Tvn1315(Δ5)能够在大肠杆菌中作为活性酶表达,但缺失10个残基(Δ10)会导致包涵体形成。为了进一步研究BD N端区域的作用,我们构建了Δ5的五个突变体,其中Tvn1315 N端的第5至10个残基分别突变为丙氨酸。每个突变蛋白都能以可溶形式回收,但只有一小部分Y9A突变体在可溶部分中回收。以可溶形式回收的Y9A突变体与其他蛋白具有相似的比活性。随后对Δ5中Tvn1315第9位的突变分析表明,芳香族以及大的疏水残基能够正常发挥功能,但带有羟基的残基会损害溶解性。基于未截短的Tvn1315的突变体也得到了类似结果。当表达预测的BD、Δ5BD、Δ10BD和BD突变体时,Δ10BD蛋白形成包涵体,BD突变体的行为与Δ5和全长酶突变体相似。这些结果表明,疏水区域在折叠过程中参与了BD的溶解。综上所述,这些结果表明CD的溶解性取决于BD的折叠。要点:• BD的N端疏水区域参与蛋白质折叠。• BD的N端疏水区域也参与BD的折叠。• BD能够与不溶性β-葡聚糖发生弱相互作用。

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