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来自孟加拉国卡格拉乔里地区一份新冠肺炎临床样本的新型冠状病毒2毒株的基因组序列

Genome Sequence of a SARS-CoV-2 Strain from a COVID-19 Clinical Sample from the Khagrachari District of Bangladesh.

作者信息

Hoq M Imranul, Bhuiyan Robiul Hasan, Rahman M Khondakar Raziur, Hossen Imam, Rudra Sajib, Hossain M Arif, Paul Shanta, Faruq M Omer, Faruque Mohammad Omar, Masud H M Abdullah Al

机构信息

Department of Microbiology, Faculty of Biological Sciences, University of Chittagong, Chattogram, Bangladesh.

Department of Biochemistry and Molecular Biology, Faculty of Biological Sciences, University of Chittagong, Chattogram, Bangladesh.

出版信息

Microbiol Resour Announc. 2021 Apr 1;10(13):e00189-21. doi: 10.1128/MRA.00189-21.

DOI:10.1128/MRA.00189-21
PMID:33795344
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8104052/
Abstract

This study describes the genome sequence of a severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) strain detected in the nasopharyngeal swab sample of a coronavirus disease 2019 (COVID-19) patient from the southeastern Khagrachari District of Bangladesh.

摘要

本研究描述了从孟加拉国东南部哈格拉乔里区一名2019冠状病毒病(COVID-19)患者的鼻咽拭子样本中检测到的严重急性呼吸综合征冠状病毒2(SARS-CoV-2)毒株的基因组序列。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24f6/8104052/21e914c35a32/MRA.00189-21-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24f6/8104052/21e914c35a32/MRA.00189-21-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24f6/8104052/21e914c35a32/MRA.00189-21-f0001.jpg

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本文引用的文献

1
The species Severe acute respiratory syndrome-related coronavirus: classifying 2019-nCoV and naming it SARS-CoV-2.严重急性呼吸综合征相关冠状病毒:将 2019-nCoV 进行分类并命名为 SARS-CoV-2。
Nat Microbiol. 2020 Apr;5(4):536-544. doi: 10.1038/s41564-020-0695-z. Epub 2020 Mar 2.
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A pneumonia outbreak associated with a new coronavirus of probable bat origin.一种新型冠状病毒引发的肺炎疫情,该病毒可能来源于蝙蝠。
Nature. 2020 Mar;579(7798):270-273. doi: 10.1038/s41586-020-2012-7. Epub 2020 Feb 3.
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Genome Detective: an automated system for virus identification from high-throughput sequencing data.
基因组侦探:一种从高通量测序数据中自动识别病毒的系统。
Bioinformatics. 2019 Mar 1;35(5):871-873. doi: 10.1093/bioinformatics/bty695.
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Nextstrain: real-time tracking of pathogen evolution.Nextstrain:实时追踪病原体进化。
Bioinformatics. 2018 Dec 1;34(23):4121-4123. doi: 10.1093/bioinformatics/bty407.
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GISAID: Global initiative on sharing all influenza data - from vision to reality.全球流感数据共享倡议组织:从愿景到现实的全球共享所有流感数据倡议
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