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中国海南岛特有濒危木材物种(山榄科)的完整叶绿体基因组。

The complete chloroplast genome of (Sapotaceae), an endemic and endangered timber species in Hainan Island, China.

作者信息

Wang Yong, Wang Hai-Tao, Chen Yu-Kai, Yu Jing, Yang Yong

机构信息

Ministry of Education Key Laboratory for Ecology of Tropical Islands, College of Life Sciences, Hainan Normal University, Haikou, China.

Institute of Cotton, Hebei Academy of Agriculture and Forestry Sciences, Shijiazhuang, China.

出版信息

Mitochondrial DNA B Resour. 2021 Mar 15;6(3):755-757. doi: 10.1080/23802359.2021.1878954.

Abstract

Chun & F.C.How is an endangered and endemic species in Hainan Island, and it was ranked as a VU (Vulnerable) species in China. In this study, we reported its complete chloroplast (cp) genome sequence based on high throughput sequencing data. The complete cp genome was 159,630 bp in length, containing two short inverted repeat (IRs) of 26,093 bp, a large single copy (LSC) region of 88,846 bp and a small single copy (SSC) region of 18,598 bp. Totally, the cp genome contained 131 genes, including 86 protein coding genes (PCG), eight rRNA genes and 37 tRNAs. The GC contents of this genome was 36.8%. A maximum likelihood (ML) phylogenetic analysis indicates that is closely related to .

摘要

春与F.C.豪是海南岛的一种濒危特有物种,在中国被列为易危(VU)物种。在本研究中,我们基于高通量测序数据报道了其完整的叶绿体(cp)基因组序列。完整的cp基因组长度为159,630 bp,包含两个26,093 bp的短反向重复序列(IRs)、一个88,846 bp的大单拷贝(LSC)区域和一个18,598 bp的小单拷贝(SSC)区域。该cp基因组总共包含131个基因,包括86个蛋白质编码基因(PCG)、8个rRNA基因和37个tRNA。该基因组的GC含量为36.8%。最大似然(ML)系统发育分析表明,[此处原文缺失具体物种名称]与[此处原文缺失具体物种名称]密切相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fff1/7971245/9b7ebdc3c3b4/TMDN_A_1878954_F0001_B.jpg

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