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一种濒危物种(兰科)的完整叶绿体基因组。

The complete chloroplast genome of an Endangered species (Orchidaceae).

作者信息

Zhang Yong-Qiang, Li Ting-Zhang, Huang Jie, Chen Gui-Zhen, Zhang Guo-Qiang

机构信息

Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization, Shenzhen, China.

Shenzhen Key Laboratory for Orchid Conservation and Utilization, The National Orchid Conservation Centre of China and The Orchid Conservation and Research Centre of Shenzhen, Shenzhen, China.

出版信息

Mitochondrial DNA B Resour. 2019 Jul 13;4(2):2497-2498. doi: 10.1080/23802359.2019.1638327.

Abstract

Y.S.Wu & S.C.Chen is an IUCN Red listed Endangered species and distributes in South-Central China and Hainan. Here, we report the complete chloroplast (cp) genome sequence and the cp genome features of The complete chloroplast (cp) genome sequence of was 149,776 bp in length. It presented a typical quadripartite structure including one large single-copy region (LSC, 85,392 bp), one small single-copy region (SSC, 14,210 bp), and two inverted repeat regions (IRs, 25,087 bp). The cp genome encoded 133 genes, of which 104 were unique genes (77 protein-coding genes, 23 tRNAs, and 4 rRNAs). The maximum-likelihood phylogenetic analysis showed that was closely related to other species of genus

摘要

吴萸叶五加和 Chen S.C. 是世界自然保护联盟红色名录中的濒危物种,分布于中国中南部和海南。在此,我们报告了吴萸叶五加完整叶绿体(cp)基因组序列及cp基因组特征。其完整叶绿体(cp)基因组序列长度为149,776 bp。它呈现出典型的四分体结构,包括一个大单拷贝区域(LSC,85,392 bp)、一个小单拷贝区域(SSC,14,210 bp)和两个反向重复区域(IRs,25,087 bp)。该cp基因组编码133个基因,其中104个为独特基因(77个蛋白质编码基因、23个tRNA和4个rRNA)。最大似然系统发育分析表明,吴萸叶五加与该属的其他物种密切相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9fd5/7687592/911c806ec2bc/TMDN_A_1638327_F0001_B.jpg

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