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火龙果((Haw.) D.R.Hunt)叶绿体基因组全序列及系统发育分析

Complete chloroplast genome sequence and phylogenetic analysis of dragon fruit ( (Haw.) D.R.Hunt).

作者信息

Liu Jin, Liu Zi-Yan, Zheng Cheng, Niu Ying-Feng

机构信息

Yunnan Institute of Tropical Crops, Xishuangbanna, China.

出版信息

Mitochondrial DNA B Resour. 2021 Mar 24;6(3):1154-1156. doi: 10.1080/23802359.2021.1903356.

Abstract

Selenicereus undatus (Haw.) D.R.Hunt is a member of the family Cactaceae. The chloroplast genome of S. undatus was sequenced, assembled, and annotated in the present study. The chloroplast genome was 133,326 bp in length, consisting of a typical quadripartite circle: a large single-copy region of 68,256 bp, two inverted repeat regions of 21,677 bp, and a small single copy region of 21,716 bp. A total of 120 predicted genes were identified, and a maximum likelihood was constructed, placing S. undatus as the sister taxon of Lophocereus schottii and Carnegiea gigantea, other members of the family Cactaceae.

摘要

量天尺(学名:Selenicereus undatus (Haw.) D.R.Hunt)是仙人掌科的一员。在本研究中,对量天尺的叶绿体基因组进行了测序、组装和注释。叶绿体基因组长度为133,326碱基对,由典型的四分体环状结构组成:一个68,256碱基对的大单拷贝区域、两个21,677碱基对的反向重复区域和一个21,716碱基对的小单拷贝区域。共鉴定出120个预测基因,并构建了最大似然树,结果表明量天尺是仙人掌科其他成员——肖特鸡冠柱(Lophocereus schottii)和巨人柱(Carnegiea gigantea)的姐妹分类群。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b1da/7995865/b035315a4ac3/TMDN_A_1903356_F0001_B.jpg

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