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(车前科)的完整叶绿体基因组序列。

The complete chloroplast genome sequence of (Plantaginaceae).

作者信息

Yu Jiaojun, Dong Hongjin

机构信息

Hubei Key Laboratory of Economic Forest Germplasm Improvement and Resources Comprehensive Utilization, Huanggang Normal University, Huanggang, China.

Hubei Collaborative Innovation Center for the Characteristic Resources Exploitation of Dabie Mountains, Huanggang, China.

出版信息

Mitochondrial DNA B Resour. 2021 Aug 30;6(9):2777-2778. doi: 10.1080/23802359.2021.1967802. eCollection 2021.

DOI:10.1080/23802359.2021.1967802
PMID:34471702
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8405061/
Abstract

L. is an annual aquatic or marsh plant, wide spread in temperate regions throughout the world. In present study, we sequenced, assembled and annotated the complete chloroplast (cp) genome of . The length of complete cp genome was 150,138 bp, with a typical quadripartite structure comprising a pair of inverted repeat regions (IRs; 25,667 bp), a large single copy region (LSC; 81,432 bp) and a small single copy region (SSC; 17,372 bp). The whole cp genome contained 134 genes, including 89 protein-coding genes (PCGs), 37 transfer RNA (tRNA) genes, and eight ribosomal RNA (rRNA) genes. The maximum likelihood (ML) phylogenetic analysis indicated that was a member of Plantaginaceae, but the relationships between subfamilies and tribes need more samplings. This cp genome would provide a valuable genetic resource for ' phylogenetic study.

摘要

L.是一种一年生水生或沼泽植物,广泛分布于世界各地的温带地区。在本研究中,我们对L.的完整叶绿体(cp)基因组进行了测序、组装和注释。完整cp基因组的长度为150,138 bp,具有典型的四分体结构,包括一对反向重复区域(IRs;25,667 bp)、一个大单拷贝区域(LSC;81,432 bp)和一个小单拷贝区域(SSC;17,372 bp)。整个cp基因组包含134个基因,包括89个蛋白质编码基因(PCGs)、37个转运RNA(tRNA)基因和8个核糖体RNA(rRNA)基因。最大似然(ML)系统发育分析表明,L.是车前科的一员,但亚科和族之间的关系需要更多的样本。这个cp基因组将为L.的系统发育研究提供有价值的遗传资源。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c319/8405061/76ba620d04d9/TMDN_A_1967802_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c319/8405061/76ba620d04d9/TMDN_A_1967802_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c319/8405061/76ba620d04d9/TMDN_A_1967802_F0001_C.jpg

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引用本文的文献

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