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小檗科一种中国特有的传统中药材的完整叶绿体基因组。

The complete chloroplast genome of (Berberidaceae), an endemic and traditional Chinese medicinal herb.

作者信息

Feng Tu, Xiao Qun-Ying, Li Wang-Jun, Zhang Chun, He Yang, Fan Gang

机构信息

School of Ecological Engineering, Guizhou University of Engineering Science, Bijie, PR China.

School of Medical Technology, Chengdu University of Traditional Chinese Medicine, Chengdu, PR China.

出版信息

Mitochondrial DNA B Resour. 2021 Mar 24;6(3):1175-1177. doi: 10.1080/23802359.2021.1901625.

Abstract

is a frequently-used traditional Chinese medicinal herb that included various active alkaloids. In this study, we assembled the complete chloroplast (cp) genome of . The complete cp genome of is 166,275 bp in length, and has a typical structure with large single-copy (LSC 73,624 bp) and small single-copy (SSC 18,608 bp) regions separated by a pair of inverted repeats (IRs 37,019 bp) of large size. The cp genome contains 147 genes, of which 101 protein-coding genes, 8 rRNA genes, and 38 tRNA genes. The phylogenetic analysis revealed that species closely clustered with species, which obviously support that Mahonia and Berberis are not monophyletic.

摘要

是一种常用的传统中草药,含有多种活性生物碱。在本研究中,我们组装了的完整叶绿体(cp)基因组。的完整cp基因组长度为166,275 bp,具有典型结构,大的单拷贝(LSC 73,624 bp)和小的单拷贝(SSC 18,608 bp)区域被一对大的反向重复序列(IRs 37,019 bp)隔开。的cp基因组包含147个基因,其中101个蛋白质编码基因、8个rRNA基因和38个tRNA基因。系统发育分析表明,物种与物种紧密聚类,这明显支持十大功劳属和小檗属不是单系的。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/be76/7995825/5240b9d8efc8/TMDN_A_1901625_F0001_C.jpg

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