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基因多态性揭示了欧洲鳎鱼卵发育的异常。

Genes Polymorphism Depicts Developmental Disruption of Common Sole Eggs.

作者信息

Kavouras Menelaos, Malandrakis Emmanouil E, Danis Theodoros, Blom Ewout, Anastassiadis Konstantinos, Panagiotaki Panagiota, Exadactylos Athanasios

机构信息

Fytokou str, 38446, Volos, Greece.

Department of Ichthyology and Aquatic Environment, School of Agricultural Sciences, University of Thessaly, Fytokou str, Volos, Greece.

出版信息

Open Life Sci. 2019 Dec 31;14:549-563. doi: 10.1515/biol-2019-0061. eCollection 2019 Jan.

Abstract

In sole aquaculture production, consistency in the quality of produced eggs throughout the year is unpredictable. genes have a crucial role in controlling embryonic development and their genetic variation could alter the phenotype dramatically. In teleosts genome duplication led paralog genes to become diverged. Direct association of polymorphism in , & of with egg viability indicates as a potential genetic marker. High Resolution Melt (HRM) analysis was carried out in 52 viable and 61 non-viable eggs collected at 54±6 hours post fertilization (hpf). Allelic and genotypic frequencies of polymorphism were analyzed and results illustrated a significantly increased risk for non-viability for minor alleles and their homozygous genotypes. Haplotype analysis demonstrated a significant recessive effect on the risk of non-viability, by increasing the odds of disrupting embryonic development up to three-fold. Phylogenetic analysis showed that the paralog genes and , are separated distinctly in two clades and presented a significant ω variation, revealing their diverged evolutionary rate.

摘要

在单一水产养殖生产中,全年所产鱼卵质量的一致性是不可预测的。基因在控制胚胎发育中起着关键作用,其遗传变异可能会极大地改变表型。在硬骨鱼中,基因组复制导致旁系同源基因发生分化。与鱼卵活力直接相关的[具体基因名称]的多态性表明[该基因]是一个潜在的遗传标记。在受精后54±6小时(hpf)收集的52枚有活力鱼卵和61枚无活力鱼卵上进行了高分辨率熔解(HRM)分析。分析了多态性的等位基因和基因型频率,结果表明次要等位基因及其纯合基因型的无活力风险显著增加。单倍型分析表明,通过将破坏胚胎发育的几率提高至三倍,对无活力风险有显著的隐性影响。系统发育分析表明,旁系同源基因[具体基因名称]和[具体基因名称]在两个进化枝中明显分开,并呈现出显著的ω变异,揭示了它们不同的进化速率。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7710/7874752/3bd15cc09cce/biol-14-549-g001.jpg

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