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中国民间草药植物冬青(冬青科)的完整叶绿体基因组序列。

The complete chloroplast genome sequence of Sims. (Aquifoliaceae), a folk herbal medicine plant in China.

作者信息

Zhou Yanwei, Li Naiwei, Chen Hong, Chong Xinran, Li Yunlong, Lu Xiaoqing, Zhou Ting, Zhang Fan

机构信息

Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing, PR China.

出版信息

Mitochondrial DNA B Resour. 2021 Mar 26;6(3):1241-1242. doi: 10.1080/23802359.2021.1904800.

Abstract

The complete chloroplast (cp) genome of , an important economic plant with ornamental and ecological values, was sequenced to investigate its phylogenetic relationship. The entire cp genome of was 157,885 bp in length with 37.61% overall GC content, including a large single-copy (LSC) region of 87,289 bp, and a small single-copy (SSC) region of 18,388 bp, which were separated by a pair of inverted repeats (IRs) of 52,208 bp. The cp genome contained 135 genes, including 90 protein-coding genes, 37 genes, and eight genes. Phylogenetic analysis based on whole cp genome sequences showed that was closely related to and species.

摘要

[该植物名称]是一种具有观赏和生态价值的重要经济植物,对其完整叶绿体(cp)基因组进行测序以研究其系统发育关系。[该植物名称]的整个cp基因组长度为157,885 bp,总体GC含量为37.61%,包括一个87,289 bp的大单拷贝(LSC)区域和一个18,388 bp的小单拷贝(SSC)区域,它们被一对52,208 bp的反向重复序列(IRs)隔开。cp基因组包含135个基因,包括90个蛋白质编码基因、37个[此处原文缺失具体基因类型]基因和8个[此处原文缺失具体基因类型]基因。基于整个cp基因组序列的系统发育分析表明,[该植物名称]与[此处原文缺失相关植物名称]和[此处原文缺失相关植物名称]物种密切相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f918/8008935/c6f201cd205a/TMDN_A_1904800_F0001_B.jpg

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