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从珊瑚 Mussismilia braziliensis 中分离出的黄杆菌 362.3 的基因组序列揭示了与海洋环境适应相关的基因。

Genome sequence of Vibrio fluvialis 362.3 isolated from coral Mussismilia braziliensis reveals genes related to marine environment adaptation.

机构信息

Institute of Biology, Federal University of Rio de Janeiro (UFRJ), Rio de Janeiro, Brazil.

Biomedical Engineer Program - COPPE (UFRJ), Rio de Janeiro, Brazil.

出版信息

Arch Microbiol. 2021 Aug;203(6):3683-3686. doi: 10.1007/s00203-021-02279-6. Epub 2021 Apr 7.

DOI:10.1007/s00203-021-02279-6
PMID:33829291
Abstract

Vibrio fluvialis is a halophilic bacterium frequently found in estuarine and coastal waters environments. The strain 362.3 was isolated from Mussismilia braziliensis coral of Abrolhos Bank. In this study, to gain insights into the marine adaptation in V. fluvialis, we sequenced the genome of 362.3 strain, which comprised 4,607,294 bp with a G + C content of 50.2%. In silico analysis showed that V. fluvialis 362.2 encodes genes related to chitin catabolic pathway, iron metabolism, osmotic stress and membrane transport.

摘要

河流弧菌是一种嗜盐菌,常存在于河口和沿海海域环境中。菌株 362.3 是从阿布罗霍斯银行的巴西石珊瑚中分离出来的。在这项研究中,为了深入了解河流弧菌的海洋适应性,我们对 362.3 菌株进行了基因组测序,该基因组包含 4607294bp,G+C 含量为 50.2%。计算机分析表明,河流弧菌 362.2 编码与几丁质分解途径、铁代谢、渗透胁迫和膜转运相关的基因。

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