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两种人单链 DNA 结合蛋白 hSSB1(NABP2/OBFC2B)和 hSSB2(NAPB1/OBFC2A)的表达、纯化和溶液态 NMR 分析。

Expression, Purification, and Solution-State NMR Analysis of the Two Human Single-Stranded DNA-Binding Proteins hSSB1 (NABP2/OBFC2B) and hSSB2 (NAPB1/OBFC2A).

机构信息

School of Science, Western Sydney University, Penrith, NSW, Australia.

School of Life and Environmental Sciences, University of Sydney, Sydney, NSW, Australia.

出版信息

Methods Mol Biol. 2021;2281:229-240. doi: 10.1007/978-1-0716-1290-3_14.

DOI:10.1007/978-1-0716-1290-3_14
PMID:33847962
Abstract

Single-stranded DNA-binding proteins (SSBs) are essential to all living organisms as protectors and guardians of the genome. Apart from the well-characterized RPA, humans have also evolved two further SSBs, termed hSSB1 and hSSB2. Over the last few years, we have used NMR spectroscopy to determine the molecular and structural details of both hSSBs and their interactions with DNA and RNA. Here we provide a detailed overview of how to express and purify recombinant versions of these important human proteins for the purpose of detailed structural analysis by high-resolution solution-state NMR.

摘要

单链 DNA 结合蛋白(SSBs)作为基因组的保护者和守护者,对所有生物都是必不可少的。除了众所周知的 RPA 之外,人类还进化出了另外两种 SSB,分别称为 hSSB1 和 hSSB2。在过去的几年中,我们使用 NMR 光谱学来确定这两种 hSSB 及其与 DNA 和 RNA 的相互作用的分子和结构细节。在这里,我们提供了一个详细的概述,介绍如何表达和纯化这些重要的人类蛋白质的重组版本,以便通过高分辨率溶液 NMR 进行详细的结构分析。

相似文献

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本文引用的文献

1
The structural details of the interaction of single-stranded DNA binding protein hSSB2 (NABP1/OBFC2A) with UV-damaged DNA.单链 DNA 结合蛋白 hSSB2(NABP1/OBFC2A)与紫外线损伤 DNA 相互作用的结构细节。
Proteins. 2020 Feb;88(2):319-326. doi: 10.1002/prot.25806. Epub 2019 Aug 30.
2
A Structural Perspective on the Regulation of Human Single-Stranded DNA Binding Protein 1 (hSSB1, OBFC2B) Function in DNA Repair.关于人类单链DNA结合蛋白1(hSSB1,OBFC2B)在DNA修复中功能调控的结构视角
Comput Struct Biotechnol J. 2019 Mar 28;17:441-446. doi: 10.1016/j.csbj.2019.03.014. eCollection 2019.
3
Human single-stranded DNA binding protein 1 (hSSB1, OBFC2B), a critical component of the DNA damage response.
人单链 DNA 结合蛋白 1(hSSB1,OBFC2B),是 DNA 损伤反应的关键组成部分。
Semin Cell Dev Biol. 2019 Feb;86:121-128. doi: 10.1016/j.semcdb.2018.03.014. Epub 2018 Mar 28.
4
Backbone H, C and N resonance assignments of the OB domain of the single stranded DNA-binding protein hSSB2 (NABP1/OBFC2A) and chemical shift mapping of the DNA-binding interface.单链DNA结合蛋白hSSB2(NABP1/OBFC2A)OB结构域的主链H、C和N共振归属以及DNA结合界面的化学位移图谱
Biomol NMR Assign. 2018 Apr;12(1):107-111. doi: 10.1007/s12104-017-9789-9. Epub 2017 Oct 24.
5
A data-driven structural model of hSSB1 (NABP2/OBFC2B) self-oligomerization.hSSB1(NABP2/OBFC2B)自寡聚化的数据驱动结构模型。
Nucleic Acids Res. 2017 Aug 21;45(14):8609-8620. doi: 10.1093/nar/gkx526.
6
High-affinity RNA binding by a hyperthermophilic single-stranded DNA-binding protein.嗜热单链DNA结合蛋白的高亲和力RNA结合
Extremophiles. 2017 Mar;21(2):369-379. doi: 10.1007/s00792-016-0910-2. Epub 2017 Jan 10.
7
A structural analysis of DNA binding by hSSB1 (NABP2/OBFC2B) in solution.溶液中hSSB1(NABP2/OBFC2B)与DNA结合的结构分析。
Nucleic Acids Res. 2016 Sep 19;44(16):7963-73. doi: 10.1093/nar/gkw617. Epub 2016 Jul 7.
8
hSSB1 (NABP2/OBFC2B) is regulated by oxidative stress.人源单链DNA结合蛋白1(NABP2/OBFC2B)受氧化应激调控。
Sci Rep. 2016 Jun 8;6:27446. doi: 10.1038/srep27446.
9
Backbone (1)H, (13)C and (15)N resonance assignments of the OB domain of the single stranded DNA-binding protein hSSB1 (NABP2/OBFC2B) and chemical shift mapping of the DNA-binding interface.单链DNA结合蛋白hSSB1(NABP2/OBFC2B)OB结构域的骨架(1)H、(13)C和(15)N共振归属以及DNA结合界面的化学位移图谱
Biomol NMR Assign. 2016 Oct;10(2):297-300. doi: 10.1007/s12104-016-9687-6. Epub 2016 May 18.
10
Single-stranded DNA-binding proteins: multiple domains for multiple functions.单链 DNA 结合蛋白:多功能多结构域。
Structure. 2013 Jul 2;21(7):1074-84. doi: 10.1016/j.str.2013.05.013.