Rangaswamy Ashok Nanjaiah, Ashok Arpitha, Hanumanthappa Pradeep, Chandrashekaramurthy Aparanji Sinduvalli, Kumbaiah Monika, Hiregouda Pratibha, Sharma Vaishali, Sosalegowda Aparna Huligerepura
Department of Studies in Biotechnology, University of Mysore, Manasagangothri, Mysore, Karnataka 570 006 India.
Int J Pept Res Ther. 2021;27(3):1799-1813. doi: 10.1007/s10989-021-10211-1. Epub 2021 Apr 8.
It is well established fact that peptides from various foods offer human health benefits displaying diverse functionalities. Millets considered as super foods is a major alternative in recent days for traditional diet being rich in proteins and fibre along with trace minerals and vitamins. In this connection, proteins from Buckwheat and Quinoa were digested by in vitro simulation digestion for the generation of peptides, analyzed by nLC-MS/MS and the functional annotations of the identified proteins/peptides were carried out. The study led to the identification of 34 small peptides and their parent proteins clustered into 4 gene functional groups and their localization prediction indicated their involvement in energy metabolism, transport and storage. Interestingly, the identified peptides maximally displayed DPP-IV and ACE inhibitions. The present study was extended to unravel ACE-2 inhibition targeting COVID-19 by selecting ACE-2-Spike binding domain for molecular docking studies. The NWRTVKYG interacted with the ACE-2-Spike interface displaying the feasible binding energy (- 213.63) and docking score (- 12.43) and the MD simulation revealed the ability of the peptide in stabilizing the protein-peptide composite. The present investigation thus establishes newer vista for food derived peptides having ACE-2 inhibitory potential as tentative strategy for SARS-CoV-2 therapeutics.
各种食物中的肽对人体健康有益且具有多种功能,这是一个公认的事实。近年来,被视为超级食物的小米成为传统饮食的主要替代品,因为它富含蛋白质、纤维以及微量矿物质和维生素。在此方面,通过体外模拟消化法对荞麦和藜麦中的蛋白质进行消化以生成肽,采用纳升液相色谱-串联质谱法(nLC-MS/MS)进行分析,并对鉴定出的蛋白质/肽进行功能注释。该研究鉴定出34种小肽及其母蛋白,它们聚为4个基因功能组,其定位预测表明它们参与能量代谢、运输和储存。有趣的是,鉴定出的肽最大程度地表现出二肽基肽酶-IV(DPP-IV)和血管紧张素转换酶(ACE)抑制活性。本研究通过选择ACE-2-刺突蛋白结合域进行分子对接研究,扩展至揭示针对2019冠状病毒病(COVID-19)的ACE-2抑制作用。NWRTVKYG与ACE-2-刺突蛋白界面相互作用,显示出可行的结合能(-213.63)和对接分数(-12.43),分子动力学(MD)模拟揭示了该肽稳定蛋白质-肽复合物的能力。因此,本研究为具有ACE-2抑制潜力的食物源肽开辟了新视野,作为严重急性呼吸综合征冠状病毒2(SARS-CoV-2)治疗的初步策略。