Zhou Yan, Zhang Limin, Song Sirong, Xu Lixia, Yan Yan, Wu Haiyang, Tong Xiaoguang, Yan Hua
Clinical College of Neurology, Neurosurgery and Neurorehabilitation, Tianjin Medical University, Tianjin, China.
Tianjin Key Laboratory of Cerebral Vascular and Neurodegenerative Diseases, Tianjin Neurosurgical Institute, Tianjin Huanhu Hospital, Tianjin, China.
Front Genet. 2021 Mar 30;12:649270. doi: 10.3389/fgene.2021.649270. eCollection 2021.
Growth arrest-specific 2 like 3 (GAS2L3) is a cytoskeleton-associated protein that interacts with actin filaments and tubulin. Abnormal GAS2L3 expression has been reported to be associated with carcinogenesis. However, the biological role of GAS2L3 in glioma remains to be determined.
The transcriptome level of GAS2L3 and its relationship with clinicopathological characteristics were analyzed among multiple public databases and clinical specimens. Bioinformatics analyses were conducted to explore biological functions and prognostic value of GAS2L3 in glioma.
GAS2L3 was substantially expressed in glioma, and high GAS2L3 expression correlated with shorter overall survival time and poor clinical variables. Gene set enrichment analysis (GSEA), single-sample gene-set enrichment analysis, and CIBERSORT algorithm analyses showed that GAS2L3 expression was closely linked to immune-related pathways, inflammatory activities, and immune cell infiltration. Moreover, GAS2L3 was synergistic with T cell-inflamed gene signature, immune checkpoints, T-cell receptor diversities, and neoantigen numbers.
This study suggests that GAS2L3 is a prognostic biomarker for glioma, providing a reference for further study of the potential role of GAS2L3 in the immunomodulation of glioma.
生长停滞特异性2样蛋白3(GAS2L3)是一种与细胞骨架相关的蛋白,可与肌动蛋白丝和微管蛋白相互作用。据报道,GAS2L3表达异常与肿瘤发生有关。然而,GAS2L3在胶质瘤中的生物学作用仍有待确定。
在多个公共数据库和临床标本中分析GAS2L3的转录组水平及其与临床病理特征的关系。进行生物信息学分析以探索GAS2L3在胶质瘤中的生物学功能和预后价值。
GAS2L3在胶质瘤中大量表达,高GAS2L3表达与较短的总生存时间和不良临床变量相关。基因集富集分析(GSEA)、单样本基因集富集分析和CIBERSORT算法分析表明,GAS2L3表达与免疫相关途径、炎症活动和免疫细胞浸润密切相关。此外,GAS2L3与T细胞炎症基因特征、免疫检查点、T细胞受体多样性和新抗原数量具有协同作用。
本研究表明,GAS2L3是胶质瘤的预后生物标志物,为进一步研究GAS2L3在胶质瘤免疫调节中的潜在作用提供了参考。