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miR-155-5p通过CD36、VAV3和SOCS1途径对减缓泡沫细胞动脉粥样硬化的预测作用。

miR-155-5p predictive role to decelerate foam cell atherosclerosis through CD36, VAV3, and SOCS1 pathway.

作者信息

Rachmawati Ermin, Sargowo Djanggan, Rohman M Saifur, Widodo Nashi, Kalsum Umi

机构信息

Doctoral Program of Medical Science, Faculty of Medicine, Universitas Brawijaya, Malang, Indonesia.

Faculty of Medicine and Health Sciences UIN Maulana Malik Ibrahim Malang.

出版信息

Noncoding RNA Res. 2021 Mar 8;6(2):59-69. doi: 10.1016/j.ncrna.2021.02.003. eCollection 2021 Jun.

Abstract

MicroRNAs (miRNAs) are noncoding RNA molecules that play a significant role in atherosclerosis pathogenesis through post-transcriptional regulation. In the present work, a bioinformatic analysis using TargetScan and miRdB databases was performed to identify the miRNAs targeting three genes involved in foam cell atherosclerosis (CD36, Vav3, and SOCS1). A total number of three hundred and sixty-seven miRNAs were recognized and only miR-155-5p was selected for further evaluation based on Venn analysis. Another objective of this study was to evaluate the biological process and regulatory network of miR-155-5p associated with foam cell atherosclerosis using DIANA, DAVID, Cytoscape, and STRING tools. Additionally, the comprehensive literature review was performed to prove the miR-155-5p function in foam cell atherosclerosis. miR-155-5p might be related with ox-LDL uptake and endocytosis in macrophage cell by targeting CD36 and Vav3 genes which was showed from the KEGG pathways hsa04979, hsa04666, hsa04145 H, hsa04810, and GO:0099632, GO:0060100, GO:0010743, GO:001745. Furthermore, miR-155-5p was also predicted to increase the cholesterol efflux from macrophage by inhibit SOCS1 expression based on KEGG pathway hsa04120. Eleven original studies were included in the review and strongly suggest the role of miR-155-5p in foam cell atherosclerosis inhibition.

摘要

微小RNA(miRNA)是非编码RNA分子,通过转录后调控在动脉粥样硬化发病机制中发挥重要作用。在本研究中,利用TargetScan和miRdB数据库进行了生物信息学分析,以鉴定靶向参与泡沫细胞动脉粥样硬化的三个基因(CD36、Vav3和SOCS1)的miRNA。共识别出367个miRNA,基于维恩分析仅选择miR-155-5p进行进一步评估。本研究的另一个目的是使用DIANA、DAVID、Cytoscape和STRING工具评估与泡沫细胞动脉粥样硬化相关的miR-155-5p的生物学过程和调控网络。此外,进行了全面的文献综述以证实miR-155-5p在泡沫细胞动脉粥样硬化中的功能。KEGG通路hsa04979、hsa04666、hsa04145 H、hsa04810以及GO:0099632、GO:0060100、GO:0010743、GO:001745显示,miR-155-5p可能通过靶向CD36和Vav3基因与巨噬细胞中氧化型低密度脂蛋白(ox-LDL)的摄取和内吞作用相关。此外,基于KEGG通路hsa04120预测,miR-155-5p还可通过抑制SOCS1表达增加巨噬细胞的胆固醇流出。该综述纳入了11项原始研究,有力地表明了miR-155-5p在抑制泡沫细胞动脉粥样硬化中的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8d65/8027696/0fe75d5dfd6c/gr1.jpg

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