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分子结中通过核酸的去局域化辅助输运。

Delocalization-Assisted Transport through Nucleic Acids in Molecular Junctions.

机构信息

Department of Chemistry, Duke University, Durham, North Carolina 27708, United States.

Department of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, United States.

出版信息

Biochemistry. 2021 May 4;60(17):1368-1378. doi: 10.1021/acs.biochem.1c00072. Epub 2021 Apr 19.

DOI:10.1021/acs.biochem.1c00072
PMID:33870693
Abstract

The flow of charge through molecules is central to the function of supramolecular machines, and charge transport in nucleic acids is implicated in molecular signaling and DNA repair. We examine the transport of electrons through nucleic acids to understand the interplay of resonant and nonresonant charge carrier transport mechanisms. This study reports STM break junction measurements of peptide nucleic acids (PNAs) with a G-block structure and contrasts the findings with previous results for DNA duplexes. The conductance of G-block PNA duplexes is much higher than that of the corresponding DNA duplexes of the same sequence; however, they do not display the strong even-odd dependence conductance oscillations found in G-block DNA. Theoretical analysis finds that the conductance oscillation magnitude in PNA is suppressed because of the increased level of electronic coupling interaction between G-blocks in PNA and the stronger PNA-electrode interaction compared to that in DNA duplexes. The strong interactions in the G-block PNA duplexes produce molecular conductances as high as 3% , where is the quantum of conductance, for 5 nm duplexes.

摘要

电荷在分子中的流动是超分子机器功能的核心,而核酸中的电荷传输则与分子信号转导和 DNA 修复有关。我们研究了电子通过核酸的传输,以了解共振和非共振电荷载流子输运机制的相互作用。本研究报告了具有 G 块结构的肽核酸 (PNA) 的 STM 断键测量结果,并将这些结果与以前的 DNA 双链体结果进行了对比。G 块 PNA 双链体的电导比具有相同序列的相应 DNA 双链体高得多;然而,它们并没有显示出在 G 块 DNA 中发现的强奇偶电导振荡依赖性。理论分析发现,由于 PNA 中 G 块之间的电子耦合相互作用以及与 DNA 双链体相比更强的 PNA-电极相互作用,PNA 中的电导振荡幅度被抑制。在 G 块 PNA 双链体中,强相互作用产生了高达 3%的分子电导,其中 是电导的量子,对于 5nm 的双链体。

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Delocalization-Assisted Transport through Nucleic Acids in Molecular Junctions.分子结中通过核酸的去局域化辅助输运。
Biochemistry. 2021 May 4;60(17):1368-1378. doi: 10.1021/acs.biochem.1c00072. Epub 2021 Apr 19.
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Effects of the Backbone and Chemical Linker on the Molecular Conductance of Nucleic Acid Duplexes.骨架和连接基团对核酸双链体分子电导率的影响。
J Am Chem Soc. 2017 May 17;139(19):6726-6735. doi: 10.1021/jacs.7b02260. Epub 2017 May 4.
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Evidence for a near-resonant charge transfer mechanism for double-stranded peptide nucleic acid.双链肽核酸的近共振电荷转移机制的证据。
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The single-molecule conductance and electrochemical electron-transfer rate are related by a power law.单分子电导率和电化学电子转移速率相关,符合幂律关系。
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Chirality. 2005;17 Suppl:S196-204. doi: 10.1002/chir.20128.
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Control of electron transfer in DNA by peptide nucleic acids (PNA).肽核酸(PNA)对DNA中电子转移的控制。
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PNA-DNA duplexes, triplexes, and quadruplexes are stabilized with trans-cyclopentane units.肽核酸 - 脱氧核糖核酸双链体、三链体和四链体通过反式环戊烷单元得以稳定。
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Peptide nucleic acid-DNA duplexes containing the universal base 3-nitropyrrole.含有通用碱基3-硝基吡咯的肽核酸-脱氧核糖核酸双链体。
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PNA versus DNA: effects of structural fluctuations on electronic structure and hole-transport mechanisms.肽核酸与脱氧核糖核酸:结构波动对电子结构和空穴传输机制的影响。
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