Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya, Aichi, Japan.
Graduate School of Engineering, Nagasaki University, Nagasaki, Nagasaki, Japan; Organization for Marine Science and Technology, Nagasaki University, Nagasaki, Nagasaki, Japan.
J Biol Chem. 2021 Jan-Jun;296:100679. doi: 10.1016/j.jbc.2021.100679. Epub 2021 Apr 17.
Polyprenyl groups, products of isoprenoid metabolism, are utilized in peptidoglycan biosynthesis, protein N-glycosylation, and other processes. These groups are formed by cis-prenyltransferases, which use allylic prenyl pyrophosphates as prenyl-donors to catalyze the C-prenylation of the general acceptor substrate, isopentenyl pyrophosphate. Repetition of this reaction forms (Z,E-mixed)-polyprenyl pyrophosphates, which are converted later into glycosyl carrier lipids, such as undecaprenyl phosphate and dolichyl phosphate. MM_0014 from the methanogenic archaeon Methanosarcina mazei is known as a versatile cis-prenyltransferase that accepts both isopentenyl pyrophosphate and dimethylallyl pyrophosphate as acceptor substrates. To learn more about this enzyme's catalytic activity, we determined the X-ray crystal structures of MM_0014 in the presence or absence of these substrates. Surprisingly, one structure revealed a complex with O-prenylglycerol, suggesting that the enzyme catalyzed the prenylation of glycerol contained in the crystallization buffer. Further analyses confirmed that the enzyme could catalyze the O-prenylation of small alcohols, such as 2-propanol, expanding our understanding of the catalytic ability of cis-prenyltransferases.
多聚异戊烯基团是异戊烯代谢产物,参与肽聚糖生物合成、蛋白质 N-糖基化等过程。这些基团由顺式 prenyltransferase 形成,该酶使用烯丙基 prenyl pyrophosphate 作为 prenyl 供体,催化一般受体底物异戊烯基 pyrophosphate 的 C 位 prenylation。重复此反应形成(Z,E-混合)-多聚异戊烯 pyrophosphate,随后转化为糖基载体脂质,如十一碳烯基磷酸酯和二氢萜烯基磷酸酯。来自产甲烷古菌 Methanosarcina mazei 的 MM_0014 是一种多功能的顺式 prenyltransferase,可接受异戊烯基 pyrophosphate 和 dimethylallyl pyrophosphate 作为受体底物。为了更深入地了解该酶的催化活性,我们在存在或不存在这些底物的情况下测定了 MM_0014 的 X 射线晶体结构。令人惊讶的是,其中一个结构揭示了与 O-prenylglycerol 的复合物,表明该酶催化了结晶缓冲液中甘油的 prenylation。进一步的分析证实,该酶可以催化小分子醇的 O-prenylation,如 2-丙醇,扩展了我们对顺式 prenyltransferase 催化能力的理解。