Chemistry and Physics of Materials Unit, Jawaharlal Nehru Centre for Advanced Scientific Research, Bangalore 560064, India.
Phys Chem Chem Phys. 2021 Mar 28;23(12):7302-7312. doi: 10.1039/d0cp05964a. Epub 2021 Mar 22.
Solvent-free enzymes hold the promise of being able to deliver higher activity at elevated temperatures by virtue of them being not limited by the boiling point of the solvent. They have been realized in the liquid phase through a polymer surfactant coating on the protein surface. However, a clear understanding of intermolecular interactions, structure, dynamics, and the behaviour of the minuscule amount of water present in the solvent-free protein liquid is essential to enhance the activity of these biofluids. Using atomistic molecular dynamics simulations, we demonstrate that the scaled spatial correlations between proteins in the hybrid liquid phase of Lipase A enzymes are comparable to the inter-particle correlations in a noble gas fluid. The hydrophilic region of the surfactants forms a coronal layer around each enzyme which percolates throughout the liquid, while the hydrophobic parts are present as disjointed clusters. Inter-surfactant interactions, determined to be attractive and in the range of -200 to -300 kcal mol, stabilize the liquid state. While the protein retains its native state conformational dynamics in the solvent-free form, the fluxionality of its side chains is much reduced; at 333 K, the latter is found to be equivalent to that of the enzyme in an aqueous solution at 249 K. Despite the sluggishness of the solvent-free enzyme, some water molecules exhibit high mobility and transit between enzymes primarily via the interspersed hydrophilic regions. These microscopic insights offer ideas to improve substrate diffusion in the liquid to enable the enhancement of catalytic activity.
无溶剂酶有望通过不受溶剂沸点限制的方式在高温下提供更高的活性。它们已经通过在蛋白质表面涂覆聚合物表面活性剂在液相中实现。然而,为了提高这些生物流体的活性,必须清楚地了解分子间相互作用、结构、动力学以及无溶剂蛋白质液体中存在的微量水的行为。使用原子分子动力学模拟,我们证明了在脂肪酶 A 酶的混合液相中蛋白质之间的缩放空间相关性与惰性气体流体中的颗粒间相关性相当。表面活性剂的亲水区在每个酶周围形成一个冠状层,贯穿整个液体,而疏水区则呈不连续的团簇存在。表面活性剂之间的相互作用被确定为吸引力,范围在-200 到-300 kcal/mol 之间,稳定了液体状态。虽然蛋白质在无溶剂形式下保持其天然状态构象动力学,但侧链的流动性大大降低;在 333 K 时,发现后者相当于在 249 K 的水溶液中的酶的流动性。尽管无溶剂酶的流动性较差,但一些水分子表现出高迁移率,并主要通过分散的亲水区在酶之间转移。这些微观见解为改善液体中的底物扩散提供了思路,以提高催化活性。