Sindi Ikhlas A, Babalghith Ahmed O, Tayeb Mohammed T, Mufti Ahmad H, Naffadi Hind, Ekram Samar N, Elhawary Ezzeldin N, Alenezi Munaifah, Elhawary Nasser A
Department of Biotechnology, Faculty of Science, King Abdulaziz University, Jeddah, 21589, Saudi Arabia.
Department of Medical Genetics, Faculty of Medicine, Umm Al-Qura University, Mecca, 21955, Saudi Arabia.
Int J Gen Med. 2021 Apr 15;14:1311-1323. doi: 10.2147/IJGM.S294802. eCollection 2021.
PURPOSE: Colorectal carcinoma (CRC) represents a considerable public health burden in Saudi Arabia. Several candidate genes and genetic variants have been associated with morbidity and mortality among patients with CRC. We explored whether allelic variants of the (rs4646903 and rs1048943), and (rs1042522) genes predisposed nonsmoking Saudi individuals to increased risk for CRC. PATIENTS AND METHODS: DNA from buccal cells of 158 participants (80 with CRC and 78 healthy controls) were analyzed for five SNPs using conventional PCR and TaqMan genotyping assays. The SNPStats software was utilized to choose the best interactive inheritance mode for selected SNPs (https://www.snpstats.net). RESULTS: The mean age of diagnosis was 62.4±13.5 years (range, 40-83 years), with those aged 71-80 years and those aged 40-50 years accounting for the most diagnoses (35.7% and 28.6% of diagnosis, respectively). The and rs1042522 SNPs were associated with CRC (OR= 3.7; < 0.0001, and OR= 1.6; = 0.033, respectively). A plausible contribution to CRC was observed for the and rs1042522 SNPs ( = 14.7; = 0.00013, and = 11.2; = 0.0008, respectively), while the null variant did not affect risk. Heterozygosity in the (rs4646903 and rs1048943 SNPs) was associated with a significant risk for CRC. The / and rs4646903/rs1048943 SNP pairs were in linkage disequilibrium, and the associations were statistically significant (= 0.01 and = 4.6x10, respectively). CONCLUSION: The and rs1042522 variants can increase the development of CRC in Saudi nonsmokers. Even the presence of one copy of a variant allele in the gene can predispose CRC risk. Additional studies should also examine other SNP combinations with lifestyle factors that may help prevent, rather than facilitate, colorectal tumorigenesis.
目的:在沙特阿拉伯,结直肠癌(CRC)是一项相当大的公共卫生负担。一些候选基因和基因变异与CRC患者的发病率和死亡率相关。我们探究了(rs4646903和rs1048943)以及(rs1042522)基因的等位基因变异是否使不吸烟的沙特人患CRC的风险增加。 患者与方法:使用常规PCR和TaqMan基因分型检测法,对158名参与者(80例CRC患者和78名健康对照)颊细胞中的DNA进行了5个单核苷酸多态性(SNP)分析。利用SNPStats软件为选定的SNP选择最佳的交互遗传模式(https://www.snpstats.net)。 结果:诊断时的平均年龄为62.4±13.5岁(范围40 - 83岁),其中71 - 80岁和40 - 50岁的患者诊断人数最多(分别占诊断人数的35.7%和28.6%)。和rs1042522这两个SNP与CRC相关(OR分别为3.7;<0.0001,以及OR为1.6;=0.033)。观察到和rs1042522这两个SNP对CRC有显著影响(分别为=14.7;=0.00013,以及=11.2;=0.0008),而的无效变异不影响风险。(rs4646903和rs1048943这两个SNP)的杂合性与患CRC的显著风险相关。/和rs4646903/rs1048943这两对SNP处于连锁不平衡状态,且相关性具有统计学意义(分别为=0.01和=4.6×10)。 结论:和rs1042522变异可增加沙特不吸烟者患CRC的几率。即使基因中存在一个变异等位基因拷贝也会使患CRC的风险增加。其他研究还应检查其他SNP组合与可能有助于预防而非促进结直肠癌发生的生活方式因素。
Oncotarget. 2018-4-20
Asian Pac J Cancer Prev. 2016
Genes (Basel). 2022-12-13
J Epidemiol Glob Health. 2020-12
Gastroenterology. 2020-7
J Environ Sci Health C Environ Carcinog Ecotoxicol Rev. 2019
Int J Cancer. 2018-12-6