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Conidae 中的网状进化:核和线粒体渐渗的证据。

Reticulate evolution in Conidae: Evidence of nuclear and mitochondrial introgression.

机构信息

University of Michigan, Department of Ecology & Evolutionary Biology, 1105 North University Avenue, Biological Sciences Building, Ann Arbor, MI 48109-1085, USA.

出版信息

Mol Phylogenet Evol. 2021 Aug;161:107182. doi: 10.1016/j.ympev.2021.107182. Epub 2021 Apr 20.

DOI:10.1016/j.ympev.2021.107182
PMID:33892099
Abstract

Conidae is a hyperdiverse family of marine snails that has many hallmarks of adaptive radiation. Hybridization and introgression may contribute to such instances of rapid diversification by generating novel gene combinations that facilitate exploitation of distinct niches. Here we evaluated whether or not these mechanisms may have contributed to the evolutionary history of a subgenus of Conidae (Virroconus). Several observations hint at evidence of past introgression for members of this group, including incongruence between phylogenetic relationships inferred from mitochondrial gene sequences and morphology and widespread sympatry of many Virroconus species in the Indo-West Pacific. We generated and analyzed transcriptome data of Virroconus species to (i) infer a robust nuclear phylogeny, (ii) assess mitochondrial and nuclear gene tree discordance, and (iii) formally test for introgression of nuclear loci. We identified introgression of mitochondrial genomes and nuclear gene regions between ancestors of one pair of Virroconus species, and mitochondrial introgression between another pair. We also found evidence of adaptive introgression of conotoxin venom loci between a third pair of species. Together, our results demonstrate that hybridization and introgression impacted the evolutionary history of Virroconus and hence may have contributed to the adaptive radiation of Conidae.

摘要

锥螺科是一个海洋蜗牛的超多样化家族,具有许多适应辐射的特征。杂交和基因渗入可能通过产生新的基因组合,促进对不同生态位的利用,从而导致这种快速多样化的情况。在这里,我们评估了这些机制是否可能对锥螺科(Virroconus)的一个亚属的进化历史做出了贡献。有几个观察结果暗示了这个群体的成员过去有基因渗入的证据,包括从线粒体基因序列和形态推断出的系统发育关系之间的不一致,以及许多 Virroconus 物种在印度-西太平洋的广泛同域分布。我们生成并分析了 Virroconus 物种的转录组数据,以(i)推断出一个稳健的核系统发育,(ii)评估线粒体和核基因树的不匹配,以及(iii)正式测试核基因座的基因渗入。我们确定了一对 Virroconus 物种的祖先之间的线粒体基因组和核基因区域的基因渗入,以及另一对之间的线粒体基因渗入。我们还发现了第三对物种之间毒液基因座适应性基因渗入的证据。总的来说,我们的结果表明,杂交和基因渗入影响了 Virroconus 的进化历史,因此可能促进了锥螺科的适应辐射。

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