• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

利用新的整合位点扩展用于酿酒酵母基因组的 EasyClone-MarkerFree 工具包。

Expansion of EasyClone-MarkerFree toolkit for Saccharomyces cerevisiae genome with new integration sites.

机构信息

The Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Kemitorvet Building 220, DK-2800 Kgs. Lyngby, Denmark.

Ajinomoto-Genetika Research Institute, Moscow, Russian Federation.

出版信息

FEMS Yeast Res. 2021 May 11;21(4). doi: 10.1093/femsyr/foab027.

DOI:10.1093/femsyr/foab027
PMID:33893795
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8112480/
Abstract

Biotechnological production requires genetically stable recombinant strains. To ensure genomic stability, recombinant DNA is commonly integrated into the genome of the host strain. Multiple genetic tools have been developed for genomic integration into baker's yeast Saccharomyces cerevisiae. Previously, we had developed a vector toolkit EasyClone-MarkerFree for stable integration into eleven sites on chromosomes X, XI, and XII of S. cerevisiae. The markerless integration was enabled by CRISPR-Cas9 system. In this study, we have expanded the kit with eight additional intergenic integration sites located on different chromosomes. The integration efficiency into the new sites was above 80%. The expression level of green fluorescence protein (gfp) for all eight sites was similar or above XI-2 site from the original EasyClone-MarkerFree toolkit. The cellular growth was not affected by the integration into any of the new eight locations. The eight-vector expansion kit is available from AddGene.

摘要

生物技术生产需要遗传稳定的重组菌株。为了确保基因组稳定性,重组 DNA 通常被整合到宿主菌株的基因组中。已经开发了多种用于基因组整合到酿酒酵母 Saccharomyces cerevisiae 中的遗传工具。以前,我们开发了一个用于稳定整合到酿酒酵母 X、XI 和 XII 染色体上十一个位点的载体工具包 EasyClone-MarkerFree。无标记整合是通过 CRISPR-Cas9 系统实现的。在这项研究中,我们用位于不同染色体上的另外八个基因间整合位点扩展了试剂盒。新位点的整合效率超过 80%。所有八个位点的绿色荧光蛋白 (gfp) 的表达水平与原始 EasyClone-MarkerFree 工具包中的 XI-2 位点相似或更高。整合到任何新的八个位置都不会影响细胞生长。这个由八个载体组成的扩展工具包可从 Addgene 获取。

相似文献

1
Expansion of EasyClone-MarkerFree toolkit for Saccharomyces cerevisiae genome with new integration sites.利用新的整合位点扩展用于酿酒酵母基因组的 EasyClone-MarkerFree 工具包。
FEMS Yeast Res. 2021 May 11;21(4). doi: 10.1093/femsyr/foab027.
2
EasyClone-MarkerFree: A vector toolkit for marker-less integration of genes into Saccharomyces cerevisiae via CRISPR-Cas9.易克隆-无标记:一种通过CRISPR-Cas9将基因无标记整合到酿酒酵母中的载体工具包。
Biotechnol J. 2016 Aug;11(8):1110-7. doi: 10.1002/biot.201600147. Epub 2016 Jun 23.
3
A highly efficient single-step, markerless strategy for multi-copy chromosomal integration of large biochemical pathways in Saccharomyces cerevisiae.一种用于酿酒酵母中大型生化途径多拷贝染色体整合的高效单步、无标记策略。
Metab Eng. 2016 Jan;33:19-27. doi: 10.1016/j.ymben.2015.10.011. Epub 2015 Nov 4.
4
The MyLO CRISPR-Cas9 toolkit: a markerless yeast localization and overexpression CRISPR-Cas9 toolkit.MyLO CRISPR-Cas9 工具包:一种无标记酵母定位和过表达 CRISPR-Cas9 工具包。
G3 (Bethesda). 2022 Jul 29;12(8). doi: 10.1093/g3journal/jkac154.
5
The yeast platform engineered for synthetic gRNA-landing pads enables multiple gene integrations by a single gRNA/Cas9 system.酵母平台工程化用于合成 gRNA 着陆垫,可通过单个 gRNA/Cas9 系统实现多个基因的整合。
Metab Eng. 2021 Mar;64:111-121. doi: 10.1016/j.ymben.2021.01.011. Epub 2021 Feb 4.
6
A teaching protocol demonstrating the use of EasyClone and CRISPR/Cas9 for metabolic engineering of Saccharomyces cerevisiae and Yarrowia lipolytica.一种教学方案,演示了如何使用 EasyClone 和 CRISPR/Cas9 进行酿酒酵母和解脂耶氏酵母的代谢工程改造。
FEMS Yeast Res. 2020 Mar 1;20(2). doi: 10.1093/femsyr/foz062.
7
Multiplex engineering of industrial yeast genomes using CRISPRm.利用CRISPRm对工业酵母基因组进行多重工程改造。
Methods Enzymol. 2014;546:473-89. doi: 10.1016/B978-0-12-801185-0.00023-4.
8
Expanding the neutral sites for integrated gene expression in Saccharomyces cerevisiae.拓展酿酒酵母中整合基因表达的中性位点。
FEMS Microbiol Lett. 2022 Sep 14;369(1). doi: 10.1093/femsle/fnac081.
9
Easy efficient HDR-based targeted knock-in in genome using CRISPR-Cas9 system.利用 CRISPR-Cas9 系统在基因组中进行简便高效的 HDR 靶向基因敲入。
Bioengineered. 2022 Jun;13(6):14857-14871. doi: 10.1080/21655979.2022.2162667.
10
Cpf1-assisted efficient genomic integration of in vivo assembled DNA parts in Saccharomyces cerevisiae.Cpf1辅助的酿酒酵母体内组装DNA片段的高效基因组整合
Biotechnol Lett. 2018 Aug;40(8):1253-1261. doi: 10.1007/s10529-018-2574-8. Epub 2018 May 24.

引用本文的文献

1
Genetic tools for metabolic engineering of .用于……代谢工程的遗传工具。 (你提供的原文似乎不完整,最后的“of”后面缺少具体内容 )
Eng Microbiol. 2023 Jun 14;3(4):100094. doi: 10.1016/j.engmic.2023.100094. eCollection 2023 Dec.
2
Protein moonlighting by a target gene dominates phenotypic divergence of the Sef1 transcriptional regulatory network in yeasts.一个靶基因的蛋白质兼职作用主导了酵母中Sef1转录调控网络的表型差异。
Nucleic Acids Res. 2024 Dec 11;52(22):13914-13930. doi: 10.1093/nar/gkae1147.
3
A Multiplex MoClo Toolkit for Extensive and Flexible Engineering of .

本文引用的文献

1
Transcriptional control of gene expression in Pichia pastoris by manipulation of terminators.通过操纵终止子对毕赤酵母基因表达进行转录控制。
Appl Microbiol Biotechnol. 2020 Sep;104(18):7841-7851. doi: 10.1007/s00253-020-10785-8. Epub 2020 Jul 27.
2
Metabolic Engineering of for Rosmarinic Acid Production.利用代谢工程生产迷迭香酸。
ACS Synth Biol. 2020 Aug 21;9(8):1978-1988. doi: 10.1021/acssynbio.0c00048. Epub 2020 Jul 27.
3
How to turn an organism into a model organism in 10 'easy' steps.如何在 10 个“简单”步骤中将一个生物体变成模式生物。
用于广泛而灵活的. 工程的多路复用 MoClo 工具包
ACS Synth Biol. 2023 Nov 17;12(11):3393-3405. doi: 10.1021/acssynbio.3c00423. Epub 2023 Nov 6.
4
Expanding the genome editing toolbox of Saccharomyces cerevisiae with the endonuclease ErCas12a.利用内切酶 ErCas12a 扩展酿酒酵母的基因组编辑工具盒。
FEMS Yeast Res. 2023 Jan 4;23. doi: 10.1093/femsyr/foad043.
5
A DNA assembly toolkit to unlock the CRISPR/Cas9 potential for metabolic engineering.用于代谢工程的解锁 CRISPR/Cas9 潜能的 DNA 组装工具包。
Commun Biol. 2023 Aug 18;6(1):858. doi: 10.1038/s42003-023-05202-5.
6
EnSor Kit for Engineering and Biosensor-Driven Investigation of the Intracellular Environment.EnSor 试剂盒,用于工程和生物传感器驱动的细胞内环境研究。
ACS Synth Biol. 2023 Aug 18;12(8):2493-2497. doi: 10.1021/acssynbio.3c00124. Epub 2023 Aug 8.
7
Acceleration of CRISPR/Cas9-Mediated Editing at Multiple Sites in the Genome.基因组中多个位点的CRISPR/Cas9介导编辑的加速
Methods Protoc. 2023 Apr 4;6(2):39. doi: 10.3390/mps6020039.
8
A DNA assembly toolkit to unlock the CRISPR/Cas9 potential for metabolic engineering.一种用于释放CRISPR/Cas9在代谢工程中潜力的DNA组装工具包。
Res Sq. 2023 Apr 4:rs.3.rs-2738543. doi: 10.21203/rs.3.rs-2738543/v1.
9
Challenges to Ensure a Better Translation of Metabolic Engineering for Industrial Applications.确保代谢工程在工业应用中更好地转化的挑战。
Methods Mol Biol. 2023;2553:1-20. doi: 10.1007/978-1-0716-2617-7_1.
10
Expansion of the Yeast Modular Cloning Toolkit for CRISPR-Based Applications, Genomic Integrations and Combinatorial Libraries.用于基于CRISPR的应用、基因组整合和组合文库的酵母模块化克隆工具包的扩展
ACS Synth Biol. 2021 Dec 17;10(12):3461-3474. doi: 10.1021/acssynbio.1c00408. Epub 2021 Dec 3.
J Exp Biol. 2020 Feb 7;223(Pt Suppl 1):jeb218198. doi: 10.1242/jeb.218198.
4
Yeast Systems Biology: Model Organism and Cell Factory.酵母系统生物学:模式生物与细胞工厂。
Biotechnol J. 2019 Sep;14(9):e1800421. doi: 10.1002/biot.201800421. Epub 2019 May 20.
5
EasyClone-MarkerFree: A vector toolkit for marker-less integration of genes into Saccharomyces cerevisiae via CRISPR-Cas9.易克隆-无标记:一种通过CRISPR-Cas9将基因无标记整合到酿酒酵母中的载体工具包。
Biotechnol J. 2016 Aug;11(8):1110-7. doi: 10.1002/biot.201600147. Epub 2016 Jun 23.
6
Engineering Cellular Metabolism.工程细胞代谢。
Cell. 2016 Mar 10;164(6):1185-1197. doi: 10.1016/j.cell.2016.02.004.
7
EasyClone 2.0: expanded toolkit of integrative vectors for stable gene expression in industrial Saccharomyces cerevisiae strains.EasyClone 2.0:用于工业酿酒酵母菌株中稳定基因表达的整合载体扩展工具包。
J Ind Microbiol Biotechnol. 2015 Nov;42(11):1519-31. doi: 10.1007/s10295-015-1684-8. Epub 2015 Sep 16.
8
A rapid and reliable strategy for chromosomal integration of gene(s) with multiple copies.一种用于多拷贝基因染色体整合的快速可靠策略。
Sci Rep. 2015 Apr 8;5:9684. doi: 10.1038/srep09684.
9
Biofuels. Altered sterol composition renders yeast thermotolerant.生物燃料。改变固醇组成使酵母耐热。
Science. 2014 Oct 3;346(6205):75-8. doi: 10.1126/science.1258137. Epub 2014 Oct 2.
10
EasyClone: method for iterative chromosomal integration of multiple genes in Saccharomyces cerevisiae.EasyClone:一种在酿酒酵母中进行多次基因染色体整合的方法。
FEMS Yeast Res. 2014 Mar;14(2):238-48. doi: 10.1111/1567-1364.12118. Epub 2013 Nov 18.