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百部科百部属植物的完整叶绿体基因组。

The complete chloroplast genome of Lour (Stemonaceae).

作者信息

Liao Pan-Hua, Li Dong-Ling, Tong Hai-Ying

机构信息

Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing, China.

The Jiangsu Provincial Platform for Conservation and Utilization of Agricultural Germplasm, Nanjing, China.

出版信息

Mitochondrial DNA B Resour. 2021 Apr 4;6(4):1317-1318. doi: 10.1080/23802359.2021.1907806.

DOI:10.1080/23802359.2021.1907806
PMID:33898747
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8023616/
Abstract

Lour is a perennial herb in the family of Stemonaceae. It is commonly used as traditional medicine in China. Here, we assembled and annotated the complete chloroplast genome of . The chloroplast genome was 154,374 bp in length, containing a typical quadripartite structure with a large single copy (LSC) of 82,305 bp, a small single copy (SSC) of 17,929 bp, and two inverted repeats (IRa and IRb) regions of 27,070 bp each. The overall GC content of the genome was 37.88%. A total of 134 genes were annotated in the chloroplast genome, including 88 protein-coding genes, 38 transfer RNA (tRNA) genes, and 8 ribosomal RNA (rRNA) genes. Phylogenetic analysis suggested that . was closely related to and .

摘要

露是百部科的一种多年生草本植物。它在中国通常被用作传统药物。在此,我们组装并注释了……的完整叶绿体基因组。叶绿体基因组长度为154,374 bp,具有典型的四分体结构,大单拷贝(LSC)为82,305 bp,小单拷贝(SSC)为17,929 bp,两个反向重复(IRa和IRb)区域各为27,070 bp。基因组的总体GC含量为37.88%。叶绿体基因组中共注释了134个基因,包括88个蛋白质编码基因、38个转运RNA(tRNA)基因和8个核糖体RNA(rRNA)基因。系统发育分析表明……与……和……密切相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4993/8023616/9179aed1226a/TMDN_A_1907806_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4993/8023616/9179aed1226a/TMDN_A_1907806_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4993/8023616/9179aed1226a/TMDN_A_1907806_F0001_B.jpg

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本文引用的文献

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Phylogenomic and Comparative Analyses of Complete Plastomes of and (Stemonaceae).和 (野牡丹科)完整质体基因组的系统发育和比较分析。
Int J Mol Sci. 2018 Aug 13;19(8):2383. doi: 10.3390/ijms19082383.
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