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本文引用的文献

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Harmonization and Standardization of Panel-Based Tumor Mutational Burden Measurement: Real-World Results and Recommendations of the Quality in Pathology Study.基于面板的肿瘤突变负荷测量的协调和标准化:病理学质量研究的真实世界结果和建议。
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Allele Frequency-Adjusted Blood-Based Tumor Mutational Burden as a Predictor of Overall Survival for Patients With NSCLC Treated With PD-(L)1 Inhibitors.等位基因频率调整后的基于血液的肿瘤突变负担作为 PD-(L)1 抑制剂治疗 NSCLC 患者总生存期的预测指标。
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Serial ultra-deep sequencing of circulating tumor DNA reveals the clonal evolution in non-small cell lung cancer patients treated with anti-PD1 immunotherapy.循环肿瘤 DNA 的串联超深度测序揭示了抗 PD-1 免疫治疗的非小细胞肺癌患者的克隆进化。
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A multicenter analysis of genomic profiles and PD-L1 expression of primary lymphoepithelioma-like carcinoma of the lung.多中心分析肺原发性淋巴上皮瘤样癌的基因组特征和 PD-L1 表达。
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Designing gene panels for tumor mutational burden estimation: the need to shift from 'correlation' to 'accuracy'.设计用于肿瘤突变负担评估的基因panel:从“相关性”到“准确性”的转变需求。
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Spatial and Temporal Heterogeneity of Panel-Based Tumor Mutational Burden in Pulmonary Adenocarcinoma: Separating Biology From Technical Artifacts.基于面板的肺腺癌肿瘤突变负荷的时空异质性:从技术伪影中分离生物学。
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血液肿瘤突变负担可预测晚期非小细胞肺癌患者对免疫检查点抑制剂的临床反应。

Blood tumor mutation burden can predict the clinical response to immune checkpoint inhibitors in advanced non-small cell lung cancer patients.

机构信息

Department of Respiratory Diseases, Thoracic Disease Diagnosis and Treatment Center, The First Affiliated Hospital, College of Medicine, Zhejiang University, Hangzhou, 310003, Zhejiang Province, China.

Burning Rock Biotech, Guangzhou, China.

出版信息

Cancer Immunol Immunother. 2021 Dec;70(12):3513-3524. doi: 10.1007/s00262-021-02943-2. Epub 2021 Apr 25.

DOI:10.1007/s00262-021-02943-2
PMID:33899131
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10991091/
Abstract

BACKGROUND

Tissue tumor mutation burden (tTMB) assessed by whole-exome sequencing (WES), which has been regarded as the gold standard method of tTMB measurement, can predict the clinical benefits of immune checkpoint inhibitors (ICIs). Multiple studies have investigated the feasibility of utilizing large panels to evaluate TMB but have obtained conflicting results. Furthermore, whether blood TMB (bTMB) can also be a predictive biomarker in NSCLC has not been determined.

METHODS

Fifty-six advanced NSCLC patients treated with ICIs were enrolled, including an exploratory cohort (n = 42) and a small independent validation cohort (n = 14). Next-generation sequencing was performed on tumor and plasma samples collected prior to ICI treatment using a panel consisting of 520 cancer-related genes (OncoScreen) to evaluate tTMB/bTMB. WES was also performed on tumor samples to serve as references.

RESULTS

A positive correlation between tTMB derived from WES and OncoScreen was observed. OncoScreen-derived tTMB showed a positive correlation with OncoScreen-derived bTMB. Patients with OncoScreen-derived tTMB [Formula: see text] 7 mutations/Mb (p = 0.003) or bTMB [Formula: see text] 11 mutations/Mb (p = 0.0029) had superior progression-free survival (PFS). In the small validation cohort, patients with OncoScreen-derived bTMB [Formula: see text] 11 mutations/Mb exhibited longer PFS (p = 0.192) with a nonsignificant difference. In all 42 patients who had available bTMB and PFS, patients with bTMB [Formula: see text] 11 mutations/Mb had significantly longer PFS (p = 0.011) than those with bTMB [Formula: see text] 11 mutations/Mb.

CONCLUSION

Our study confirmed the feasibility of using large panels to estimate TMB. We also demonstrated that bTMB can serve as a potential biomarker for predicting the efficacy of ICIs in NSCLC.

摘要

背景

全外显子组测序(WES)评估的组织肿瘤突变负担(tTMB)已被视为 tTMB 测量的金标准方法,可预测免疫检查点抑制剂(ICI)的临床获益。多项研究已经探讨了利用大panel 评估 TMB 的可行性,但得到了相互矛盾的结果。此外,血液 TMB(bTMB)是否也可以作为 NSCLC 的预测生物标志物尚未确定。

方法

共纳入 56 例接受 ICI 治疗的晚期 NSCLC 患者,包括探索性队列(n=42)和小的独立验证队列(n=14)。使用包含 520 个癌症相关基因的panel(OncoScreen)对肿瘤和血浆样本进行下一代测序,以评估 tTMB/bTMB。WES 也在肿瘤样本上进行,作为参考。

结果

WES 得出的 tTMB 与 OncoScreen 之间存在正相关。OncoScreen 衍生的 tTMB 与 OncoScreen 衍生的 bTMB 呈正相关。OncoScreen 衍生的 tTMB [Formula: see text] 7 突变/Mb(p=0.003)或 bTMB [Formula: see text] 11 突变/Mb(p=0.0029)的患者具有更好的无进展生存期(PFS)。在小的验证队列中,OncoScreen 衍生的 bTMB [Formula: see text] 11 突变/Mb 的患者 PFS 更长(p=0.192),但差异无统计学意义。在所有 42 例有可获得的 bTMB 和 PFS 的患者中,bTMB [Formula: see text] 11 突变/Mb 的患者 PFS 明显更长(p=0.011)。

结论

我们的研究证实了使用大panel 来估计 TMB 的可行性。我们还表明,bTMB 可以作为预测 NSCLC 中 ICI 疗效的潜在生物标志物。