Department of Respiratory Diseases, Thoracic Disease Diagnosis and Treatment Center, The First Affiliated Hospital, College of Medicine, Zhejiang University, Hangzhou, 310003, Zhejiang Province, China.
Burning Rock Biotech, Guangzhou, China.
Cancer Immunol Immunother. 2021 Dec;70(12):3513-3524. doi: 10.1007/s00262-021-02943-2. Epub 2021 Apr 25.
Tissue tumor mutation burden (tTMB) assessed by whole-exome sequencing (WES), which has been regarded as the gold standard method of tTMB measurement, can predict the clinical benefits of immune checkpoint inhibitors (ICIs). Multiple studies have investigated the feasibility of utilizing large panels to evaluate TMB but have obtained conflicting results. Furthermore, whether blood TMB (bTMB) can also be a predictive biomarker in NSCLC has not been determined.
Fifty-six advanced NSCLC patients treated with ICIs were enrolled, including an exploratory cohort (n = 42) and a small independent validation cohort (n = 14). Next-generation sequencing was performed on tumor and plasma samples collected prior to ICI treatment using a panel consisting of 520 cancer-related genes (OncoScreen) to evaluate tTMB/bTMB. WES was also performed on tumor samples to serve as references.
A positive correlation between tTMB derived from WES and OncoScreen was observed. OncoScreen-derived tTMB showed a positive correlation with OncoScreen-derived bTMB. Patients with OncoScreen-derived tTMB [Formula: see text] 7 mutations/Mb (p = 0.003) or bTMB [Formula: see text] 11 mutations/Mb (p = 0.0029) had superior progression-free survival (PFS). In the small validation cohort, patients with OncoScreen-derived bTMB [Formula: see text] 11 mutations/Mb exhibited longer PFS (p = 0.192) with a nonsignificant difference. In all 42 patients who had available bTMB and PFS, patients with bTMB [Formula: see text] 11 mutations/Mb had significantly longer PFS (p = 0.011) than those with bTMB [Formula: see text] 11 mutations/Mb.
Our study confirmed the feasibility of using large panels to estimate TMB. We also demonstrated that bTMB can serve as a potential biomarker for predicting the efficacy of ICIs in NSCLC.
全外显子组测序(WES)评估的组织肿瘤突变负担(tTMB)已被视为 tTMB 测量的金标准方法,可预测免疫检查点抑制剂(ICI)的临床获益。多项研究已经探讨了利用大panel 评估 TMB 的可行性,但得到了相互矛盾的结果。此外,血液 TMB(bTMB)是否也可以作为 NSCLC 的预测生物标志物尚未确定。
共纳入 56 例接受 ICI 治疗的晚期 NSCLC 患者,包括探索性队列(n=42)和小的独立验证队列(n=14)。使用包含 520 个癌症相关基因的panel(OncoScreen)对肿瘤和血浆样本进行下一代测序,以评估 tTMB/bTMB。WES 也在肿瘤样本上进行,作为参考。
WES 得出的 tTMB 与 OncoScreen 之间存在正相关。OncoScreen 衍生的 tTMB 与 OncoScreen 衍生的 bTMB 呈正相关。OncoScreen 衍生的 tTMB [Formula: see text] 7 突变/Mb(p=0.003)或 bTMB [Formula: see text] 11 突变/Mb(p=0.0029)的患者具有更好的无进展生存期(PFS)。在小的验证队列中,OncoScreen 衍生的 bTMB [Formula: see text] 11 突变/Mb 的患者 PFS 更长(p=0.192),但差异无统计学意义。在所有 42 例有可获得的 bTMB 和 PFS 的患者中,bTMB [Formula: see text] 11 突变/Mb 的患者 PFS 明显更长(p=0.011)。
我们的研究证实了使用大panel 来估计 TMB 的可行性。我们还表明,bTMB 可以作为预测 NSCLC 中 ICI 疗效的潜在生物标志物。