MOE Key Laboratory of Bioinorganic and Synthetic Chemistry, School of Chemistry, State Key Laboratory of Oncology in South China, Sun Yat-Sen University, No. 135, Xingang Xi Road, 510275, Guangzhou, China.
School of Pharmaceutical and Chemical Engineering, Guangdong Pharmaceutical University, Changmingshui Avenue 9-13, 528458, Zhongshan, China.
Angew Chem Int Ed Engl. 2021 Jul 5;60(28):15340-15343. doi: 10.1002/anie.202104624. Epub 2021 Jun 1.
G-quadruplexes (G4s) are prevalent in oncogenes and are potential antitumor drug targets. However, binding selectivity of compounds to G4s still faces challenges. Herein, we report a platinum(II) complex (Pt1), whose affinity to G4-DNA is activated by adaptive binding and selectivity controlled by binding kinetics. The resolved structure of Pt1/VEGF-G4 (a promoter G4) shows that Pt1 matches 3'-G-tetrad of VEGF-G4 through Cl -dissociation and loop rearrangement of VEGF-G4. Binding rate constants are determined by coordination bond breakage/formation, correlating fully with affinities. The selective rate-determining binding step, Cl -dissociation upon G4-binding, is 2-3 orders of magnitude higher than dsDNA. Pt1 potently targets G4 in living cells, effectively represses VEGF expression, and inhibits vascular growth in zebrafish. We show adaptive G4-binding activation and controlled by kinetics, providing a complementary design principle for compounds targeting G4 or similar biomolecules.
四链体(G4s)广泛存在于致癌基因中,是潜在的抗肿瘤药物靶点。然而,化合物与 G4s 的结合选择性仍然面临挑战。在此,我们报告了一种铂(II)配合物(Pt1),其与 G4-DNA 的亲和力通过自适应结合得到激活,并通过结合动力学控制选择性。Pt1/VEGF-G4(启动子 G4)的解析结构表明,Pt1 通过 Cl-解离和 VEGF-G4 的环重排与 VEGF-G4 的 3'-G-四联体匹配。结合速率常数由配位键的断裂/形成决定,与亲和力完全相关。选择性的速率决定结合步骤,即 G4 结合时的 Cl-解离,比 dsDNA 高 2-3 个数量级。Pt1 能有效地靶向活细胞中的 G4,有效抑制 VEGF 的表达,并抑制斑马鱼的血管生长。我们展示了自适应的 G4 结合激活和动力学控制,为靶向 G4 或类似生物分子的化合物提供了一个补充的设计原则。