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sp. nov.,分离自火山口湖的水样。

sp. nov., isolated from water of crater lake.

机构信息

Tibet Plateau Institute of Biology, Lhasa, Tibet 850001, PR China.

China General Microbiological Culture Collection Center, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, PR China.

出版信息

Int J Syst Evol Microbiol. 2021 Apr;71(4). doi: 10.1099/ijsem.0.004791.

Abstract

A Gram-stain-negative, aerobic, flagellated, non-spore-forming, rod-shaped bacterium, named B2R-29, was isolated from water collected from a crater lake on Da Hinggan mountain, PR China. Strain B2R-29 was oxidase- and catalase-positive. On the basis of the results of 16S rRNA gene sequence analyses, strain B2R-29 clearly belonged to the family , class and showed the highest similarity to EM1 (97.4 %) and to the other species of (less than 96.8 %). In the phylogenetic tree, strain B2R-29 formed a clade with EM1 and CMJ-9, indicating that is a member of the genus . Digital DNA-DNA hybridization and average nucleotide identity analyses were performed and the values between strain B2R-29 and its closely related species were less than 75.1 % and 16.9 %, respectively. The chemotaxonomic data of B2R-29 were as follows: major uniquinone, Q-8; predominant polar lipids, phosphatidylethanolamine, diphosphatidylglycerol and phosphatidylglycerol; major fatty acids, C and summed feature 3 (C 7 / C 6); predominant polyamines, putrescine, 2-hydroxyputrescine and spermidine. The DNA G+C content was 51.7 mol% from the genomic sequencing data. In accordance with the phenotypic, physiological and chemotaxonomic properties mentioned above, strain B2R-29 represents a novel species of the genus for which the name sp. nov is proposed. The type strain is B2R-29 (=CGMCC 1.13792=KCTC 72018).

摘要

一株革兰氏阴性、需氧、鞭毛、不产芽孢的杆状细菌,被命名为 B2R-29,从中国大兴安岭火山口湖采集的水样中分离得到。B2R-29 菌株氧化酶和过氧化氢酶均为阳性。基于 16S rRNA 基因序列分析的结果,B2R-29 菌株明显属于 科、 纲和 目,与 EM1(97.4%)和其他 属的种的相似度最高(低于 96.8%)。在系统发育树中,B2R-29 菌株与 EM1 和 CMJ-9 形成一个分支,表明它是 属的一个成员。进行了数字 DNA-DNA 杂交和平均核苷酸同一性分析,B2R-29 菌株与其密切相关的种之间的数值分别小于 75.1%和 16.9%。B2R-29 的化学分类数据如下:主要醌,Q-8;主要极性脂,磷脂酰乙醇胺、双磷脂酰甘油和磷脂酰甘油;主要脂肪酸,C 和特征脂肪酸 3(C 7 / C 6);主要多胺,腐胺、2-羟腐胺和亚精胺。根据基因组测序数据,DNA G+C 含量为 51.7mol%。根据上述表型、生理和化学分类特征,B2R-29 菌株代表了 属的一个新种,建议将其命名为 sp. nov。其模式菌株是 B2R-29(=CGMCC 1.13792=KCTC 72018)。

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