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大麦花分生组织的转录图谱

Transcriptional landscapes of floral meristems in barley.

作者信息

Thiel J, Koppolu R, Trautewig C, Hertig C, Kale S M, Erbe S, Mascher M, Himmelbach A, Rutten T, Esteban E, Pasha A, Kumlehn J, Provart N J, Vanderauwera S, Frohberg C, Schnurbusch T

机构信息

Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Corrensstr. 3, OT Gatersleben, 06466 Seeland, Germany.

Department of Cell and Systems Biology/Centre for the Analysis of Genome Evolution and Function, University of Toronto, 25 Willcocks St., Toronto, ON M5S 3B2, Canada.

出版信息

Sci Adv. 2021 Apr 28;7(18). doi: 10.1126/sciadv.abf0832. Print 2021 Apr.

DOI:10.1126/sciadv.abf0832
PMID:33910893
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8081368/
Abstract

Organ development in plants predominantly occurs postembryonically through combinatorial activity of meristems; therefore, meristem and organ fate are intimately connected. Inflorescence morphogenesis in grasses (Poaceae) is complex and relies on a specialized floral meristem, called spikelet meristem, that gives rise to all other floral organs and ultimately the grain. The fate of the spikelet determines reproductive success and contributes toward yield-related traits in cereal crops. Here, we examined the transcriptional landscapes of floral meristems in the temperate crop barley ( L.) using RNA-seq of laser capture microdissected tissues from immature, developing floral structures. Our unbiased, high-resolution approach revealed fundamental regulatory networks, previously unknown pathways, and key regulators of barley floral fate and will equally be indispensable for comparative transcriptional studies of grass meristems.

摘要

植物器官发育主要在胚胎后阶段通过分生组织的组合活动发生;因此,分生组织和器官命运紧密相连。禾本科植物的花序形态发生复杂,依赖于一种特殊的花分生组织,称为小穗分生组织,它产生所有其他花器官并最终形成籽粒。小穗的命运决定了生殖成功,并对谷类作物的产量相关性状有贡献。在这里,我们使用激光捕获显微切割技术从发育中的未成熟花结构组织进行RNA测序,研究了温带作物大麦(Hordeum vulgare L.)花分生组织的转录图谱。我们无偏见的高分辨率方法揭示了基本调控网络、以前未知的途径以及大麦花命运的关键调节因子,对于禾本科分生组织的比较转录研究同样不可或缺。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6afe/8081368/68615aaf547f/abf0832-F6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6afe/8081368/c4b3d5daa432/abf0832-F1.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6afe/8081368/a278ef92d46a/abf0832-F4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6afe/8081368/252bc0435665/abf0832-F5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6afe/8081368/68615aaf547f/abf0832-F6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6afe/8081368/c4b3d5daa432/abf0832-F1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6afe/8081368/9d63001930fe/abf0832-F2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6afe/8081368/36781685bf56/abf0832-F3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6afe/8081368/a278ef92d46a/abf0832-F4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6afe/8081368/252bc0435665/abf0832-F5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6afe/8081368/68615aaf547f/abf0832-F6.jpg

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Of floral fortune: tinkering with the grain yield potential of cereal crops.花之运道:调控谷类作物的产量潜力
New Phytol. 2020 Mar;225(5):1873-1882. doi: 10.1111/nph.16189. Epub 2019 Oct 11.
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g:Profiler: a web server for functional enrichment analysis and conversions of gene lists (2019 update).
大麦中双组分系统元件的全基因组特征分析有助于鉴定谷物特异性磷酸化传递基因。
BMC Plant Biol. 2025 Feb 17;25(1):209. doi: 10.1186/s12870-025-06161-1.
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AutoXAI4Omics: an automated explainable AI tool for omics and tabular data.AutoXAI4Omics:用于组学和表格数据的自动化可解释 AI 工具。
Brief Bioinform. 2024 Nov 22;26(1). doi: 10.1093/bib/bbae593.
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