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稀有物种引起的感染。文献综述。

Infections due to Rare Species. A Literature Review.

作者信息

Morales-López Soraya E, Garcia-Effron Guillermo

机构信息

Grupo CINBIOS, Programa de Microbiología, Universidad Popular del Cesar, Valledupar 200002, Colombia.

Laboratorio de Micología y Diagnóstico Molecular, Consejo Nacional de Investigaciones Científicas y Tecnológicas, Santa Fe 3000, Argentina.

出版信息

J Fungi (Basel). 2021 Apr 7;7(4):279. doi: 10.3390/jof7040279.

Abstract

Infections due to rare species (other than species complex, species complex, or are barely reported. The aim of this work is to present a comprehensive literature review of all the papers describing infections due to these species referenced in the main databases (PubMed/MEDLINE, ScienceDirect, Scopus, and Google Scholar). Clinical and epidemiological data together with laboratory findings (identification and antifungal susceptibility) of each isolate were analyzed. Fifty-eight cryptococosis due to rare species were described in 46 papers between 1934-2018. These reports included 16 rare spp. that were generally associated with nervous system infections and fungemias. Some species are non-capsulated and are not able to grow at 37 °C. Few species were identified by commercially available methods, making internal transcriber spacer (ITS) and D1/D2 regions sequencing mandatory. The most potent antifungal was amphotericin B (although some species showed high MIC values). The studied strains showed high MICs values to 5-fluorocytosine (all >64 µg/mL), echinocandins (all >8 µg/mL), and fluconazole (>80% of the MICs >4 µg/mL). Due to the scarcity of the data and the absence of guidelines for the treatment of these infections, this review could be informative and could help in the diagnosis and treatment of these infections.

摘要

由罕见菌种(除菌种复合体、菌种复合体或外)引起的感染鲜有报道。本研究旨在对主要数据库(PubMed/MEDLINE、ScienceDirect、Scopus和谷歌学术)中引用的所有描述这些菌种引起感染的论文进行全面的文献综述。分析了每个分离株的临床和流行病学数据以及实验室检查结果(鉴定和抗真菌药敏试验)。1934年至2018年间,46篇论文中描述了58例由罕见菌种引起的隐球菌病。这些报告包括16种罕见的菌种,它们通常与神经系统感染和真菌血症有关。一些菌种无荚膜,且不能在37℃生长。很少有菌种能用商业方法鉴定,因此内部转录间隔区(ITS)和D1/D2区域测序必不可少。最有效的抗真菌药物是两性霉素B(尽管有些菌种显示出高MIC值)。研究菌株对5-氟胞嘧啶(所有>64μg/mL)、棘白菌素(所有>8μg/mL)和氟康唑(>80%的MIC>4μg/mL)显示出高MIC值。由于数据稀缺且缺乏这些感染的治疗指南,本综述可能会提供信息,并有助于这些感染的诊断和治疗。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9140/8067992/a25b0806d2e7/jof-07-00279-g001.jpg

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