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基于SSR和ISSR多态性的西高加索地区柿属种质资源的遗传多样性

Genetic Diversity in Diospyros Germplasm in the Western Caucasus Based on SSR and ISSR Polymorphism.

作者信息

Samarina Lidia S, Malyarovskaya Valentina I, Reim Stefanie, Koninskaya Natalia G, Matskiv Alexandra O, Tsaturyan Gregory A, Rakhmangulov Ruslan S, Shkhalakhova Ruset M, Shurkina Ekaterina S, Kulyan Raisa V, Omarova Zuhra M, Omarov Magomed D, Ryndin Alexey V

机构信息

Federal Research Centre the Subtropical Scientific Centre of the Russian Academy of Sciences, 354002 Sochi, Russia.

Institute for Breeding Research on Fruit Crops, Julius Kühn-Institut, Federal Research Centre for Cultivated Plants, 01326 Dresden, Germany.

出版信息

Biology (Basel). 2021 Apr 19;10(4):341. doi: 10.3390/biology10040341.

Abstract

Persimmon germplasm in the Western Caucasus represent one of the most northerly collections. In our study, 51 commercial cultivars of , 3 accessions of and 57 accessions from six geographically distant populations were investigated using 19 microsatellite and 10 inter simple sequence repeat (ISSR) markers. After STRUCTURE analysis, the single accessions of were allocated to three genetic clusters. Genetic admixtures in the important genotypes of were revealed, whereas accessions showed no admixture with other genetic clusters. The correspondence of genetic data and phenotypical traits was estimated in the collection. The most frost tolerant genotypes of the collection, such as "Mountain Rogers", "Nikitskaya Bordovaya", "Rossiyanka", "MVG Omarova", "Meader", "Costata", "BBG", and "Jiro", showed a high percentage of genetic admixtures and were grouped close to . Some of these genotypes are known to be interspecific hybrids with . A low level of genetic diversity between the distant populations was revealed and it can be speculated that was introduced to the Western Caucasus from a single germplasm source. These results are an important basis for the implementation of conservation measures, developing breeding strategies, and improving breeding efficiency.

摘要

高加索西部的柿子种质是最靠北的种质资源之一。在我们的研究中,使用19个微卫星标记和10个简单序列重复区间(ISSR)标记,对51个商业品种、3份君迁子材料以及来自6个地理上相距遥远的群体的57份柿属材料进行了研究。经过STRUCTURE分析,君迁子的单份材料被划分到三个遗传簇中。在柿属的重要基因型中发现了遗传混合现象,而柿属材料未显示与其他遗传簇的混合。在柿属材料中评估了遗传数据与表型性状的对应关系。该材料中最耐寒的基因型,如“Mountain Rogers”“Nikitskaya Bordovaya”“Rossiyanka”“MVG Omarova”“Meader”“Costata”“BBG”和“次郎”,显示出较高比例的遗传混合,并且与君迁子聚类较近。其中一些基因型已知是与君迁子的种间杂种。在相距遥远的柿属群体之间发现了较低水平的遗传多样性,可以推测柿属是从单一的种质资源引入到高加索西部的。这些结果是实施保护措施、制定育种策略和提高育种效率的重要依据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4ddf/8073590/7399f41d2856/biology-10-00341-g001.jpg

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