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J Clin Invest. 2021 May 3;131(9). doi: 10.1172/JCI148902.
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DUOX2 variants associate with preclinical disturbances in microbiota-immune homeostasis and increased inflammatory bowel disease risk.DUOX2 变体与微生物群-免疫稳态的临床前紊乱和炎症性肠病风险增加有关。
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Genetic Factors and the Intestinal Microbiome Guide Development of Microbe-Based Therapies for Inflammatory Bowel Diseases.遗传因素和肠道微生物组指导基于微生物的炎症性肠病疗法的发展。
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本文引用的文献

1
DUOX2 variants associate with preclinical disturbances in microbiota-immune homeostasis and increased inflammatory bowel disease risk.DUOX2 变体与微生物群-免疫稳态的临床前紊乱和炎症性肠病风险增加有关。
J Clin Invest. 2021 May 3;131(9). doi: 10.1172/JCI141676.
2
Serum Protein Biomarkers of Fibrosis Aid in Risk Stratification of Future Stricturing Complications in Pediatric Crohn's Disease.血清纤维化蛋白生物标志物有助于对儿童克罗恩病未来的狭窄性并发症进行风险分层。
Am J Gastroenterol. 2019 May;114(5):777-785. doi: 10.14309/ajg.0000000000000237.
3
Blood-Derived DNA Methylation Signatures of Crohn's Disease and Severity of Intestinal Inflammation.血液来源的 DNA 甲基化标志物与克罗恩病和肠道炎症的严重程度。
Gastroenterology. 2019 Jun;156(8):2254-2265.e3. doi: 10.1053/j.gastro.2019.01.270. Epub 2019 Feb 16.
4
Chemotaxis Allows Bacteria To Overcome Host-Generated Reactive Oxygen Species That Constrain Gland Colonization.趋化作用使细菌能够克服宿主产生的活性氧物种,这些活性氧物种限制了腺体定植。
Infect Immun. 2018 Apr 23;86(5). doi: 10.1128/IAI.00878-17. Print 2018 May.
5
Defensive Mutualism Rescues NADPH Oxidase Inactivation in Gut Infection.防御性互惠共生挽救了肠道感染中的 NADPH 氧化酶失活。
Cell Host Microbe. 2016 May 11;19(5):651-63. doi: 10.1016/j.chom.2016.04.007.
6
Dual oxidases control release of hydrogen peroxide by the gastric epithelium to prevent Helicobacter felis infection and inflammation in mice.双氧化酶通过胃上皮细胞控制过氧化氢的释放,以防止小鼠感染和炎症。
Gastroenterology. 2013 Nov;145(5):1045-54. doi: 10.1053/j.gastro.2013.07.011. Epub 2013 Jul 13.

解码矩阵:多组学揭示炎症性肠病的宿主-微生物生物标志物。

Decoding the matrix: multiomics reveals host-microbe biomarker for inflammatory bowel disease.

出版信息

J Clin Invest. 2021 May 3;131(9). doi: 10.1172/JCI148902.

DOI:10.1172/JCI148902
PMID:33938448
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8087194/
Abstract

Inflammatory bowel disease (IBD) is a chronic inflammatory disease of the intestine associated with genetic susceptibility and alterations in the intestinal microbiome. Multiomics data developed and analyzed over the last several decades have yielded an unprecedented amount of genetic and microbial data. But how do we pinpoint mechanistic insight into the host-microbe relationship that will ultimately enable better care for patients with IBD? In this issue of the JCI, Grasberger et al. undertook a major decoding effort to decipher this multiomic data matrix. The authors analyzed anonymized data from more than 2800 individuals to discover a link between heterozygous carriers of deleterious DUOX2 variants and high levels of plasma IL-17C. These findings provide an example of how harnessing big data can drive mechanistic discovery to define disease biomarkers that have the potential to improve clinical care in IBD.

摘要

炎症性肠病(IBD)是一种与遗传易感性和肠道微生物组改变相关的慢性肠道炎症性疾病。在过去几十年中开发和分析的多组学数据产生了前所未有的遗传和微生物数据。但是,我们如何确定对宿主-微生物关系的机制性洞察,最终为 IBD 患者提供更好的护理?在本期 JCI 中,Grasberger 等人进行了一项重大的解码工作,以破译这个多组学数据矩阵。作者分析了超过 2800 个人的匿名数据,发现具有有害 DUOX2 变异杂合子的个体与高水平的血浆 IL-17C 之间存在关联。这些发现提供了一个例子,说明如何利用大数据来推动机制性发现,以定义疾病生物标志物,从而有可能改善 IBD 的临床护理。