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转录调控中的染色质修饰因子:新发现与展望

Chromatin Modifiers in Transcriptional Regulation: New Findings and Prospects.

作者信息

Mazina M Yu, Vorobyeva N E

机构信息

Institute of Gene Biology RAS, Group of transcriptional complexes dynamics, Moscow, 119334 Russia.

出版信息

Acta Naturae. 2021 Jan-Mar;13(1):16-30. doi: 10.32607/actanaturae.11101.

DOI:10.32607/actanaturae.11101
PMID:33959384
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8084290/
Abstract

Histone-modifying and remodeling complexes are considered the main coregulators that affect transcription by changing the chromatin structure. Coordinated action by these complexes is essential for the transcriptional activation of any eukaryotic gene. In this review, we discuss current trends in the study of histone modifiers and chromatin remodelers, including the functional impact of transcriptional proteins/ complexes i.e., "pioneers"; remodeling and modification of non-histone proteins by transcriptional complexes; the supplementary functions of the non-catalytic subunits of remodelers, and the participation of histone modifiers in the "pause" of RNA polymerase II. The review also includes a scheme illustrating the mechanisms of recruitment of the main classes of remodelers and chromatin modifiers to various sites in the genome and their functional activities.

摘要

组蛋白修饰和重塑复合体被认为是通过改变染色质结构来影响转录的主要共调节因子。这些复合体的协同作用对于任何真核基因的转录激活至关重要。在本综述中,我们讨论了组蛋白修饰因子和染色质重塑因子研究的当前趋势,包括转录蛋白/复合体即“先锋因子”的功能影响;转录复合体对非组蛋白的重塑和修饰;重塑因子非催化亚基的补充功能,以及组蛋白修饰因子在RNA聚合酶II“暂停”中的参与。本综述还包括一个示意图,阐明了主要类别的重塑因子和染色质修饰因子被招募到基因组中不同位点的机制及其功能活性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b02/8084290/54fc927fd08e/AN20758251-13-01-016-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b02/8084290/aa4686e526ff/AN20758251-13-01-016-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b02/8084290/1b77406a8830/AN20758251-13-01-016-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b02/8084290/8aa1932dd4c9/AN20758251-13-01-016-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b02/8084290/da09bd8f16e6/AN20758251-13-01-016-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b02/8084290/fe61a13a6706/AN20758251-13-01-016-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b02/8084290/f9ae78bfc5a2/AN20758251-13-01-016-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b02/8084290/54fc927fd08e/AN20758251-13-01-016-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b02/8084290/aa4686e526ff/AN20758251-13-01-016-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b02/8084290/1b77406a8830/AN20758251-13-01-016-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b02/8084290/8aa1932dd4c9/AN20758251-13-01-016-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b02/8084290/da09bd8f16e6/AN20758251-13-01-016-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b02/8084290/fe61a13a6706/AN20758251-13-01-016-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b02/8084290/f9ae78bfc5a2/AN20758251-13-01-016-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b02/8084290/54fc927fd08e/AN20758251-13-01-016-g007.jpg

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本文引用的文献

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Short Residence Times of DNA-Bound Transcription Factors Can Reduce Gene Expression Noise and Increase the Transmission of Information in a Gene Regulation System.与DNA结合的转录因子的短驻留时间可降低基因表达噪声并增加基因调控系统中的信息传递。
Front Mol Biosci. 2020 Apr 28;7:67. doi: 10.3389/fmolb.2020.00067. eCollection 2020.
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The Set1 N-terminal domain and Swd2 interact with RNA polymerase II CTD to recruit COMPASS.Set1 N 端结构域和 Swd2 与 RNA 聚合酶 II CTD 相互作用,招募 COMPASS。
Nat Commun. 2020 May 1;11(1):2181. doi: 10.1038/s41467-020-16082-2.
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Dynamic Competition of Polycomb and Trithorax in Transcriptional Programming.
多梳和三价组蛋白在转录编程中的动态竞争。
Annu Rev Biochem. 2020 Jun 20;89:235-253. doi: 10.1146/annurev-biochem-120219-103641. Epub 2020 Jan 13.
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INO80 and SWR1 complexes: the non-identical twins of chromatin remodelling.INO80 和 SWR1 复合物:染色质重塑的非同源双胞胎。
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Dangerous liaisons: interplay between SWI/SNF, NuRD, and Polycomb in chromatin regulation and cancer.危险的勾结:SWI/SNF、NuRD 和 Polycomb 在染色质调控和癌症中的相互作用。
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Mammalian ISWI and SWI/SNF selectively mediate binding of distinct transcription factors.哺乳动物 ISWI 和 SWI/SNF 选择性地介导不同转录因子的结合。
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