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染色质重塑因子的作用机制及其在发育和疾病中的意义。

The mechanisms of action of chromatin remodelers and implications in development and disease.

机构信息

Department of Biological Sciences, Indian Institute of Science Education and Research, Bhopal 462066, Madhya Pradesh, India.

Department of Biological Sciences, Indian Institute of Science Education and Research, Bhopal 462066, Madhya Pradesh, India.

出版信息

Biochem Pharmacol. 2020 Oct;180:114200. doi: 10.1016/j.bcp.2020.114200. Epub 2020 Aug 15.

Abstract

The eukaryotic genetic material is packaged in the form of chromatin by wrapping DNA around nucleosomes. Cells maintain chromatin in a dynamic state by utilising various ATP-dependent chromatin remodelling complexes which can induce structural transformations in the chromatin. All chromatin remodelers contain an ATP hydrolysing-DNA translocase motor which facilitates nucleosomal DNA translocation. By DNA translocation ISWI and CHD subfamily remodelers slide nucleosomes and arrange them in a regularly spaced array. While SWI/SNF subfamily remodelers evict or displace nucleosomes from chromatin, which promotes recruitment of transcription machinery and DNA repair factors on the DNA. Besides DNA translocation, ISWI, CHD and INO80 subfamily remodelers escort nucleosome organisation and editing. In this review; we discuss different mechanisms by which chromatin remodelers regulate chromatin accessibility, nucleosome assembly and nucleosome editing. We attempt to elucidate how their action mediates various cellular and developmental processes, and their deregulation leads to disease pathogenesis. We emphasised on their role in cancer progression and potential therapeutic implications of these complexes. We also described the drugs and strategies which are being developed to target different subunits of remodelling complexes, histone modifying enzymes and polycomb repressive complex. This includes ATPase inhibitors, EZH2 (enhancer of zeste homolog 2) inhibitors, BET (bromodomain and extra terminal) inhibitors, PROTAC (proteolysis targeting chimaera) and inhibitors of protein-protein interaction.

摘要

真核生物的遗传物质通过将 DNA 缠绕在核小体周围的形式被包装成染色质。细胞通过利用各种依赖 ATP 的染色质重塑复合物来维持染色质的动态状态,这些复合物可以诱导染色质的结构转化。所有染色质重塑剂都包含一个 ATP 水解-DNA 转位酶马达,它可以促进核小体 DNA 的转位。通过 DNA 转位,ISWI 和 CHD 亚家族重塑剂滑动核小体并将它们排列成规则间隔的阵列。而 SWI/SNF 亚家族重塑剂从染色质中逐出或置换核小体,从而促进转录机制和 DNA 修复因子在 DNA 上的募集。除了 DNA 转位,ISWI、CHD 和 INO80 亚家族重塑剂还护送核小体的组织和编辑。在这篇综述中;我们讨论了染色质重塑剂调节染色质可及性、核小体组装和核小体编辑的不同机制。我们试图阐明它们的作用如何介导各种细胞和发育过程,以及它们的失调如何导致疾病的发病机制。我们强调了它们在癌症进展中的作用以及这些复合物的潜在治疗意义。我们还描述了正在开发的针对不同重塑复合物亚基、组蛋白修饰酶和多梳抑制复合物的药物和策略。这包括 ATP 酶抑制剂、EZH2(增强子的锌指蛋白 2)抑制剂、BET(溴结构域和末端)抑制剂、PROTAC(蛋白水解靶向嵌合体)和蛋白质-蛋白质相互作用抑制剂。

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