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利用高山植物的下一代测序技术改进对 Dall's 绵羊的粪便代谢组学饮食分析。

Using next generation sequencing of alpine plants to improve fecal metabarcoding diet analysis for Dall's sheep.

机构信息

School of Environmental and Forest Sciences, University of Washington, Seattle, USA.

Department of Evolutionary Anthropology, Duke University, Durham, USA.

出版信息

BMC Res Notes. 2021 May 7;14(1):173. doi: 10.1186/s13104-021-05590-z.

Abstract

OBJECTIVES

Dall's sheep (Ovis dalli dalli) are important herbivores in the mountainous ecosystems of northwestern North America, and recent declines in some populations have sparked concern. Our aim was to improve capabilities for fecal metabarcoding diet analysis of Dall's sheep and other herbivores by contributing new sequence data for arctic and alpine plants. This expanded reference library will provide critical reference sequence data that will facilitate metabarcoding diet analysis of Dall's sheep and thus improve understanding of plant-animal interactions in a region undergoing rapid climate change.

DATA DESCRIPTION

We provide sequences for the chloroplast rbcL gene of 16 arctic-alpine vascular plant species that are known to comprise the diet of Dall's sheep. These sequences contribute to a growing reference library that can be used in diet studies of arctic herbivores.

摘要

目的

多尔绵羊(Ovis dalli dalli)是北美洲西北部山区生态系统中的重要食草动物,最近一些种群数量的下降引起了人们的关注。我们的目的是通过为北极和高山植物提供新的序列数据,来提高多尔绵羊和其他食草动物粪便代谢组学饮食分析的能力。这个扩展的参考文库将提供关键的参考序列数据,这将有助于多尔绵羊的代谢组学饮食分析,从而更好地了解在快速气候变化的地区动植物的相互作用。

数据描述

我们提供了 16 种已知构成多尔绵羊饮食的北极高山维管束植物的叶绿体 rbcL 基因序列。这些序列为正在不断增长的参考文库做出了贡献,可用于北极食草动物的饮食研究。

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