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美国猪只移动网络的时间稳定性

Temporal stability of swine movement networks in the U.S.

作者信息

Makau Dennis N, Paploski Igor A D, VanderWaal Kimberly

机构信息

Department of Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota, 1365 Gortner Avenue, St. Paul, MN, 55108, USA.

Department of Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota, 1365 Gortner Avenue, St. Paul, MN, 55108, USA.

出版信息

Prev Vet Med. 2021 May 3;191:105369. doi: 10.1016/j.prevetmed.2021.105369.

Abstract

As a consequence of multi-site pig production practiced in North America, frequent and widespread animal movements create extensive networks of interaction between farms. Social network analysis (SNA) has been used to understand disease transmission risks within these complex and dynamic production ecosystems and is particularly relevant for designing risk-based surveillance and control strategies targeting highly connected farms. However, inferences from SNA and the effectiveness of targeted strategies may be influenced by temporal changes in network structure. Since farm movements represent a temporally dynamic network, it is also unclear how many months of data are required to gain an accurate picture of an individual farm's connectivity pattern and the overall network structure. The extent to which shipments between two specific farms are repeated (i.e., "loyalty" of farm contacts) can influence the rate at which the structure of a network changes over time, which may influence disease dynamics. In this study, we aimed to describe temporal stability and loyalty patterns of pig movement networks in the U.S. swine industry. We analyzed a total of 282,807 animal movements among 2724 farms belonging to two production systems between 2014 and 2017. Loyalty trends were largely driven by contacts between sow farms and nurseries and between nurseries and finisher farms; mean loyalty (percent of contacts that were repeated at least once within a 52-week interval) of farm contacts was 51-60 % for farm contacts involving weaned pigs, and 12-22% for contacts involving feeder pigs. A cyclic pattern was observed for both weaned and feeder pig movements, with episodes of increased loyalty observed at intervals of 8 and 17-20 weeks, respectively. Network stability was achieved when six months of data were aggregated, and only small shifts in node-level and global network metrics were observed when adding more data. This stability is relevant for designing targeted surveillance programs for disease management, given that movements summarized over too short a period may lead to stochastic swings in network metrics. A temporal resolution of six months would be reliable for the identification of potential super-spreaders in a network for targeted intervention and disease control. The temporal stability observed in these networks suggests that identifying highly connected farms in retrospective network data (up to 24 months) is reliable for future planning, albeit with reduced effectiveness.

摘要

由于北美地区实行多地点养猪生产,频繁且广泛的动物移动形成了农场之间广泛的互动网络。社会网络分析(SNA)已被用于了解这些复杂且动态的生产生态系统中的疾病传播风险,对于设计针对高度关联农场的基于风险的监测和控制策略尤为重要。然而,SNA的推断以及针对性策略的有效性可能会受到网络结构随时间变化的影响。由于农场移动代表一个随时间动态变化的网络,目前尚不清楚需要多少个月的数据才能准确了解单个农场的连接模式和整体网络结构。两个特定农场之间的运输重复程度(即农场联系的“忠诚度”)会影响网络结构随时间变化的速率,这可能会影响疾病动态。在本研究中,我们旨在描述美国养猪业中猪移动网络的时间稳定性和忠诚度模式。我们分析了2014年至2017年期间属于两个生产系统的2724个农场之间总共282,807次动物移动。忠诚度趋势主要由母猪场与保育场之间以及保育场与育肥场之间的联系驱动;涉及断奶仔猪的农场联系的平均忠诚度(在52周间隔内至少重复一次的联系百分比)为51 - 60%,涉及育肥猪的联系为12 - 22%。断奶仔猪和育肥猪的移动均观察到周期性模式,分别在8周和17 - 20周的间隔出现忠诚度增加的情况。当汇总六个月的数据时实现了网络稳定性,添加更多数据时仅观察到节点级和全局网络指标的微小变化。鉴于在过短时间段内汇总的移动可能导致网络指标的随机波动,这种稳定性对于设计针对疾病管理的目标监测计划很重要。六个月的时间分辨率对于识别网络中潜在的超级传播者以进行目标干预和疾病控制是可靠的。在这些网络中观察到的时间稳定性表明,在回顾性网络数据(长达24个月)中识别高度关联的农场对于未来规划是可靠的,尽管有效性会降低。

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