Tomonaga Keizo
Laboratory of RNA viruses, Department of Virus Research, Institute for Frontier Life and Medical Sciences, Kyoto University.
Uirusu. 2020;70(1):49-56. doi: 10.2222/jsv.70.49.
RNA viruses do not need to take the form of DNAs, and RNAs alone complete their replication cycles. On the other hand, since the 1970s, it has been known that DNA fragments derived from RNA viruses can be detected in RNA virus-infected cells. Furthermore, in this decade, it has become clear that the eukaryotic genomes contain genetic sequences derived from non-retroviral RNA viruses. The DNA sequences derived from these RNA viruses are thought to be generatedby using a transposable mechanism of retrotransposon, such as LINE-1. Many endogenous RNA viral sequences are formed by the same mechanism as processed pseudogenes in eukaryotic cells, but the significance of the production of RNA viral "pseudogenes " in infected cells has not been elucidated. We have discovered endogenous bornavirus-like elements (EBLs), which derived from a negative-sense, single-stranded RNA virus, Bornaviruses, and have studied the evolution and function of EBLs in host animals. The analysis of EBLs provides us a clue to unravel the history of host-RNA virus coexistence. In this review, I overview about the function of endogenous RNA virus sequences, especially EBLs in mammalian genomes, and discuss the significance of endogenization of RNA viruses as viral pseudogenes in evolution.
RNA病毒无需转化为DNA形式,仅RNA自身就能完成其复制周期。另一方面,自20世纪70年代以来,人们就已知道在RNA病毒感染的细胞中能够检测到源自RNA病毒的DNA片段。此外,在这十年间,已经明确真核生物基因组中包含源自非逆转录RNA病毒的基因序列。这些源自RNA病毒的DNA序列被认为是通过逆转座子(如LINE-1)的转座机制产生的。许多内源性RNA病毒序列的形成机制与真核细胞中加工后的假基因相同,但在受感染细胞中产生RNA病毒“假基因”的意义尚未阐明。我们发现了源自负链单链RNA病毒博尔纳病毒的内源性博尔纳病毒样元件(EBLs),并研究了EBLs在宿主动物中的进化和功能。对EBLs的分析为我们揭示宿主与RNA病毒共存的历史提供了线索。在这篇综述中,我概述了内源性RNA病毒序列的功能,特别是哺乳动物基因组中的EBLs,并讨论了RNA病毒作为病毒假基因在进化过程中内源性化的意义。