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贝加尔湖端足类(端足目:钩虾科)中的视蛋白多样性。

The diversity of opsins in Lake Baikal amphipods (Amphipoda: Gammaridae).

机构信息

Irkutsk State University, Irkutsk, Russia.

Baikal Research Centre, Irkutsk, Russia.

出版信息

BMC Ecol Evol. 2021 May 10;21(1):81. doi: 10.1186/s12862-021-01806-9.

Abstract

BACKGROUND

Vision is a crucial sense for the evolutionary success of many animal groups. Here we explore the diversity of visual pigments (opsins) in the transcriptomes of amphipods (Crustacea: Amphipoda) and conclude that it is restricted to middle (MWS) and long wavelength-sensitive (LWS) opsins in the overwhelming majority of examined species.

RESULTS

We evidenced (i) parallel loss of MWS opsin expression in multiple species (including two independently evolved lineages from the deep and ancient Lake Baikal) and (ii) LWS opsin amplification (up to five transcripts) in both Baikal lineages. The number of LWS opsins negatively correlated with habitat depth in Baikal amphipods. Some LWS opsins in Baikal amphipods contained MWS-like substitutions, suggesting that they might have undergone spectral tuning.

CONCLUSIONS

This repeating two-step evolutionary scenario suggests common triggers, possibly the lack of light during the periods when Baikal was permanently covered with thick ice and its subsequent melting. Overall, this observation demonstrates the possibility of revealing climate history by following the evolutionary changes in protein families.

摘要

背景

视觉对于许多动物群体的进化成功至关重要。在这里,我们探索了端足目(甲壳纲:端足目)转录组中视觉色素(视蛋白)的多样性,并得出结论,在绝大多数检查过的物种中,视蛋白仅限于中(MWS)和长波长敏感(LWS)视蛋白。

结果

我们证明了(i)多个物种中 MWS 视蛋白表达的平行丧失(包括来自古老而深的贝加尔湖的两个独立进化谱系)和(ii)在两个贝加尔湖谱系中 LWS 视蛋白的扩增(多达五个转录本)。LWS 视蛋白的数量与贝加尔湖端足类动物的栖息地深度呈负相关。贝加尔湖端足类动物的一些 LWS 视蛋白含有 MWS 样取代,表明它们可能经历了光谱调谐。

结论

这种重复的两步进化情景表明存在共同的触发因素,可能是贝加尔湖在长时间被厚冰覆盖及其随后融化期间缺乏光照。总的来说,这一观察结果表明,通过跟踪蛋白质家族的进化变化,有可能揭示气候历史。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f750/8108468/cec24cd0ccfb/12862_2021_1806_Fig1_HTML.jpg

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