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甲壳动物的难题:视蛋白多样性与进化综述。

Crustacean conundrums: a review of opsin diversity and evolution.

机构信息

School of Life Sciences, University of Hawai'i at Mānoa, Honolulu, HI 96822, USA.

出版信息

Philos Trans R Soc Lond B Biol Sci. 2022 Oct 24;377(1862):20210289. doi: 10.1098/rstb.2021.0289. Epub 2022 Sep 5.

Abstract

Knowledge of crustacean vision is lacking compared to the more well-studied vertebrates and insects. While crustacean visual systems are typically conserved morphologically, the molecular components (i.e. opsins) remain understudied. This review aims to characterize opsin diversity across crustacean lineages for an integrated view of visual system evolution. Using publicly available data from 95 species, we identified opsin sequences and classified them by clade. Our analysis produced 485 putative visual opsins and 141 non-visual opsins. The visual opsins were separated into six clades: long wavelength sensitive (LWS), middle wavelength sensitive (MWS) 1 and 2, short wavelength or ultraviolet sensitive (SWS/UVS) and a clade of thecostracan opsins, with multiple LWS and MWS opsin copies observed. The SWS/UVS opsins were relatively conserved in most species. The crustacean classes Cephalocarida, Remipedia and Hexanauplia exhibited reduced visual opsin diversity compared to others, with the malacostracan decapods having the highest opsin diversity. Non-visual opsins were identified from all investigated classes except Cephalocarida. Additionally, a novel clade of non-visual crustacean-specific, R-type opsins (Rc) was discovered. This review aims to provide a framework for future research on crustacean vision, with an emphasis on the need for more work in spectral characterization and molecular analysis. This article is part of the theme issue 'Understanding colour vision: molecular, physiological, neuronal and behavioural studies in arthropods'.

摘要

与研究更为深入的脊椎动物和昆虫相比,甲壳动物的视觉知识相对匮乏。虽然甲壳动物的视觉系统在形态上通常是保守的,但分子成分(即视蛋白)的研究仍不够充分。本综述旨在描述甲壳动物谱系中的视蛋白多样性,以全面了解视觉系统的进化。我们利用 95 个物种的公开可用数据,鉴定了视蛋白序列,并按进化枝对其进行了分类。我们的分析产生了 485 个假定的视觉视蛋白和 141 个非视觉视蛋白。视觉视蛋白分为六个进化枝:长波敏感(LWS)、中波敏感(MWS)1 和 2、短波或紫外线敏感(SWS/UVS)以及一个甲壳动物视蛋白进化枝,观察到多个 LWS 和 MWS 视蛋白副本。SWS/UVS 视蛋白在大多数物种中相对保守。与其他甲壳动物相比,甲壳动物类 Cephalocarida、Remipedia 和 Hexanauplia 的视觉视蛋白多样性减少,十足目甲壳动物具有最高的视蛋白多样性。除 Cephalocarida 外,所有研究的类群都鉴定出了非视觉视蛋白。此外,还发现了一种新型的非视觉甲壳动物特异性 R 型视蛋白(Rc)进化枝。本综述旨在为甲壳动物视觉的未来研究提供一个框架,强调需要更多的光谱特征和分子分析工作。本文是主题为“理解颜色视觉:节肢动物的分子、生理、神经元和行为研究”的一部分。

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