Division of Spine, Department of Orthopedics, Tongji Hospital, Tongji University School of Medicine, School of Life Science and Technology, Tongji University, Shanghai, China.
Key Laboratory of Spine and Spinal Cord Injury Repair and Regeneration, Tongji University, Ministry of Education, Shanghai, China.
Nat Commun. 2021 May 10;12(1):2614. doi: 10.1038/s41467-021-22758-0.
The differentiation of neural stem cells (NSCs) into neurons is proposed to be critical in devising potential cell-based therapeutic strategies for central nervous system (CNS) diseases, however, the determination and prediction of differentiation is complex and not yet clearly established, especially at the early stage. We hypothesize that deep learning could extract minutiae from large-scale datasets, and present a deep neural network model for predictable reliable identification of NSCs fate. Remarkably, using only bright field images without artificial labelling, our model is surprisingly effective at identifying the differentiated cell types, even as early as 1 day of culture. Moreover, our approach showcases superior precision and robustness in designed independent test scenarios involving various inducers, including neurotrophins, hormones, small molecule compounds and even nanoparticles, suggesting excellent generalizability and applicability. We anticipate that our accurate and robust deep learning-based platform for NSCs differentiation identification will accelerate the progress of NSCs applications.
神经干细胞(NSCs)向神经元的分化被认为是设计中枢神经系统(CNS)疾病潜在细胞治疗策略的关键,然而,分化的确定和预测很复杂,尚未明确建立,尤其是在早期阶段。我们假设深度学习可以从大规模数据集中提取细节,并提出了一种深度神经网络模型,用于可预测的可靠识别 NSCs 的命运。值得注意的是,我们的模型仅使用明场图像而无需人工标记,就可以非常有效地识别分化细胞类型,甚至在培养的第 1 天就可以识别。此外,我们的方法在涉及各种诱导剂(包括神经营养因子、激素、小分子化合物甚至纳米粒子)的设计独立测试场景中展示了卓越的精度和稳健性,表明其具有出色的泛化能力和适用性。我们预计,我们用于 NSCs 分化鉴定的准确而稳健的基于深度学习的平台将加速 NSCs 应用的进展。