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解析复苏植物 Haberlea rhodopensis 的完整线粒体基因组序列。

Analysis of the complete mitochondrial genome sequence of the resurrection plant Haberlea rhodopensis.

机构信息

1Institute of Molecular Biology and Biotechnology, Plovdiv, Bulgaria; 2Department of Plant Physiology and Molecular Biology, University of Plovdiv, Plovdiv, Bulgaria.

Institute of Molecular Biology and Biotechnology, Plovdiv, Bulgaria.

出版信息

Acta Biochim Pol. 2021 May 12;68(2):277-286. doi: 10.18388/abp.2020_5555.

Abstract

Haberlea rhodopensis is a paleolithic tertiary relict species that belongs to the unique group of resurrection plants sharing remarkable tolerance to desiccation. When exposed to severe drought stress, this species shows an ability to maintain structural integrity of its deactivated photosynthetic apparatus, which easily reactivates upon rehydration. In addition to its homoiochlorophyllous nature, the resurrection capability of H. rhodopensis is of particular importance to the global climate change mitigation. In this study, we sequenced, assembled, and analyzed the mitochondrial (mt) genome of H. rhodopensis for the first time. The master circle has a typical circular structure of 484 138 bp in length with a 44.1% GC content in total. The mt genome of H. rhodopensis contains 59 genes in total, including 35 protein-coding, 21 tRNAs, and 3 rRNAs genes. 7 tandem repeats and 85 simple sequence repeats (SSRs) are distributed throughout the mt genome. The alignment of 20 plant mt genomes confirms the phylogenetic position of H. rhodopensis in the Lamiales order. Our comprehensive analysis of the complete mt genome of H. rhodopensis is a significant addition to the limited database of organelle genomes of resurrection species. Comparative and phylogenetic analysis provides valuable information for a better understanding of mitochondrial molecular evolution in plants.

摘要

高山白头翁是一种古近纪第三纪的遗留物种,属于具有显著耐旱能力的独特复苏植物群。当暴露在严重的干旱胁迫下时,该物种表现出维持其失活光合作用器官结构完整性的能力,在重新水合时很容易重新激活。除了同型叶绿素特性外,高山白头翁的复苏能力对全球气候变化缓解具有特别重要的意义。在这项研究中,我们首次对高山白头翁的线粒体(mt)基因组进行了测序、组装和分析。主环具有典型的圆形结构,长度为 484138bp,总 GC 含量为 44.1%。高山白头翁的 mt 基因组共包含 59 个基因,包括 35 个蛋白质编码基因、21 个 tRNA 基因和 3 个 rRNA 基因。7 个串联重复和 85 个简单序列重复(SSR)分布在整个 mt 基因组中。20 种植物 mt 基因组的比对确认了高山白头翁在唇形目目中的系统发育位置。我们对高山白头翁完整 mt 基因组的综合分析是对复苏物种细胞器基因组有限数据库的重要补充。比较和系统发育分析为更好地理解植物中线粒体分子进化提供了有价值的信息。

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