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PLoS One. 2020 Jan 2;15(1):e0226546. doi: 10.1371/journal.pone.0226546. eCollection 2020.
3
Human leukocyte antigen class I (A, B, C) and class II (DPB1, DQB1, DRB1) allele and haplotype variation in Black South African individuals.黑人南非个体的人类白细胞抗原 I 类(A、B、C)和 II 类(DPB1、DQB1、DRB1)等位基因和单倍型变异。
Hum Immunol. 2020 Jan;81(1):6-7. doi: 10.1016/j.humimm.2019.12.003. Epub 2019 Dec 13.
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Human Leukocyte Antigen-A, B, C, DRB1, and DQB1 Allele and Haplotype Frequencies in a Subset of 237 Donors in the South African Bone Marrow Registry.在南非骨髓登记处的 237 名供者亚群中,人类白细胞抗原-A、B、C、DRB1 和 DQB1 等位基因和单倍型频率。
J Immunol Res. 2018 Apr 23;2018:2031571. doi: 10.1155/2018/2031571. eCollection 2018.
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HLA class I alleles frequencies in the Syrian population.叙利亚人群中HLA I类等位基因频率。
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7
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Human Leukocyte Antigen Diversity: A Southern African Perspective.人类白细胞抗原多样性:南非视角。
J Immunol Res. 2015;2015:746151. doi: 10.1155/2015/746151. Epub 2015 Aug 12.
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Allele frequencies database.等位基因频率数据库。
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10
The IPD and IMGT/HLA database: allele variant databases.国际参与者数据(IPD)和国际免疫遗传学信息系统/HLA数据库:等位基因变异数据库。
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南非自由邦省不同人群中的人类白细胞抗原主要等位基因组频率。

HLA major allele group frequencies in a diverse population of the Free State Province, South Africa.

作者信息

Janse van Rensburg Walter J, de Kock André, Bester Chené, Kloppers Jean F

机构信息

Human Molecular Biology Unit, School of Biomedical Sciences, Faculty of Health Sciences, University of the Free State, Bloemfontein, South Africa.

Department of Haematology and Cell Biology, School of Pathology, Faculty of Health Sciences, University of the Free State, Bloemfontein, South Africa.

出版信息

Heliyon. 2021 Apr 21;7(4):e06850. doi: 10.1016/j.heliyon.2021.e06850. eCollection 2021 Apr.

DOI:10.1016/j.heliyon.2021.e06850
PMID:33981900
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8085688/
Abstract

BACKGROUND

Human Leucocyte Antigens (HLA) play a vital role in disease pathogenesis and transplant rejection. HLA-typing is a useful tool in predicting disease progression and to identify potential organ donors. Due to human migration and known ethnic variation, frequent targeted HLA sequencing of specific populations is crucial to increase their representation in global reference panels.

MATERIALS AND METHODS

We performed a retrospective file audit of all HLA-typings done in our setting from 2005-2019. We discuss data for the major HLA-A, HLA-B, HLA-C, and HLA-DRB1 allele groups.

RESULTS

Overall, the most common allele groups were HLA-A∗02, HLA-B∗15, HLA-C∗07 and HLA-DRB1∗03. For the African descent group, the most common alleles were HLA-A∗30, HLA-B∗15, HLA-C∗07 and HLA-DRB1∗03. For the European descent group, the most common alleles were HLA-A∗02, HLA-B∗07, HLA-C∗07 and HLA-DRB1∗15. For the mixed ancestry group, the most common allele groups were HLA-A∗02, HLA-B∗15, HLA-C∗02 and HLA-DRB1∗13. HLA-B∗44 was identified as the most common allele group in patients with renal failure.

DISCUSSION AND CONCLUSION

The significant variation within the HLA frequencies between the different ethnic groups highlights the value of population-specific HLA-typing. Furthermore, the identification of HLA-B∗44 as a prominent HLA in our renal failure population warrants in-depth investigation of this group.

摘要

背景

人类白细胞抗原(HLA)在疾病发病机制和移植排斥反应中起着至关重要的作用。HLA分型是预测疾病进展和识别潜在器官供体的有用工具。由于人类迁移和已知的种族差异,对特定人群进行频繁的靶向HLA测序对于增加其在全球参考面板中的代表性至关重要。

材料与方法

我们对2005年至2019年在我们机构进行的所有HLA分型进行了回顾性文件审核。我们讨论了主要HLA-A、HLA-B、HLA-C和HLA-DRB1等位基因组的数据。

结果

总体而言,最常见的等位基因组是HLA-A∗02、HLA-B∗15、HLA-C∗07和HLA-DRB1∗03。对于非洲裔群体,最常见的等位基因是HLA-A∗30、HLA-B∗15、HLA-C∗07和HLA-DRB1∗03。对于欧洲裔群体,最常见的等位基因是HLA-A∗02、HLA-B∗07、HLA-C∗07和HLA-DRB1∗15。对于混合血统群体,最常见的等位基因组是HLA-A∗02、HLA-B∗15、HLA-C∗02和HLA-DRB1∗13。HLA-B∗44被确定为肾衰竭患者中最常见的等位基因组。

讨论与结论

不同种族群体之间HLA频率的显著差异凸显了特定人群HLA分型的价值。此外,在我们的肾衰竭人群中,HLA-B∗44被确定为突出的HLA,这值得对该群体进行深入研究。