Department of Biochemistry and Molecular Biophysics, Kansas State University, Manhattan, KS 66505, USA.
Department of Chemistry, University of Massachusetts Amherst, Amherst, MA 01003, USA.
J Mol Biol. 2021 Jul 23;433(15):167048. doi: 10.1016/j.jmb.2021.167048. Epub 2021 May 11.
Intrinsically disordered proteins (IDPs) are key components of regulatory networks that control crucial aspects of cell decision making. The intrinsically disordered transactivation domain (TAD) of tumor suppressor p53 mediates its interactions with multiple regulatory pathways to control the p53 homeostasis during the cellular response to genotoxic stress. Many cancer-associated mutations have been discovered in p53-TAD, but their structural and functional consequences are poorly understood. Here, by combining atomistic simulations, NMR spectroscopy, and binding assays, we demonstrate that cancer-associated mutations can significantly perturb the balance of p53 interactions with key activation and degradation regulators. Importantly, the four mutations studied in this work do not all directly disrupt the known interaction interfaces. Instead, at least three of these mutations likely modulate the disordered state of p53-TAD to perturb its interactions with regulators. Specifically, NMR and simulation analysis together suggest that these mutations can modulate the level of conformational expansion as well as rigidity of the disordered state. Our work suggests that the disordered conformational ensemble of p53-TAD can serve as a central conduit in regulating the response to various cellular stimuli at the protein-protein interaction level. Understanding how the disordered state of IDPs may be modulated by regulatory signals and/or disease associated perturbations will be essential in the studies on the role of IDPs in biology and diseases.
无规蛋白(IDPs)是调控网络的关键组成部分,这些调控网络控制着细胞决策的关键方面。肿瘤抑制因子 p53 的无规转录激活结构域(TAD)介导其与多个调控途径相互作用,以控制细胞对遗传毒性应激的反应过程中的 p53 动态平衡。在 p53-TAD 中已经发现了许多与癌症相关的突变,但它们的结构和功能后果知之甚少。在这里,我们通过结合原子模拟、NMR 光谱和结合测定,证明癌症相关突变可以显著改变 p53 与关键激活和降解调节剂相互作用的平衡。重要的是,在这项工作中研究的这四个突变并不都直接破坏已知的相互作用界面。相反,这些突变中的至少三个可能调节 p53-TAD 的无规状态,从而干扰其与调节剂的相互作用。具体来说,NMR 和模拟分析共同表明,这些突变可以调节无规状态的构象扩展水平以及刚性。我们的工作表明,p53-TAD 的无规构象集合可以作为在蛋白质-蛋白质相互作用水平上调节对各种细胞刺激的反应的中心通道。了解 IDPs 的无规状态如何被调节信号和/或疾病相关扰动所调节,对于研究 IDPs 在生物学和疾病中的作用至关重要。