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鉴定牛卵母细胞特异性母体效应基因 ZNFO 的核心启动子。

Identification of the core promoter of ZNFO, an oocyte-specific maternal effect gene in cattle.

机构信息

Laboratory of Animal Biotechnology and Genomics, Division of Animal and Nutritional Sciences, West Virginia University, Morgantown, WV 26506, USA.

Laboratory of Animal Biotechnology and Genomics, Division of Animal and Nutritional Sciences, West Virginia University, Morgantown, WV 26506, USA.

出版信息

Gene. 2021 Jul 30;791:145717. doi: 10.1016/j.gene.2021.145717. Epub 2021 May 13.

Abstract

ZNFO is a Krüppel-associated box (KRAB) containing zinc finger transcription factor, which is exclusively expressed in bovine oocytes. Previous studies have demonstrated that ZNFO possesses an intrinsic transcriptional repressive activity and is essential for early embryonic development in cattle. However, the mechanisms regulating ZNFO transcription remain elusive. In the present study, the core promoter that controls the ZNFO basal transcription was identified. A 1.7 kb 5' regulatory region of the ZNFO gene was cloned and its promoter activity was confirmed by a luciferase reporter assay. A series of 5' deletion in the ZNFO promoter followed by luciferase reporter assays indicated that the core promoter region has to include the sequence located within 57 bp to 31 bp upstream of the transcription start site. Sequence analysis revealed that a putative USF1/USF2 binding site (GGTCACGTGACC) containing an E-box motif (CACGTG) is located within the essential region. Depletion of USF1/USF2 by RNAi and E-box mutation analysis demonstrated that the USF1/USF2 binding site is required for the ZNFO basal transcription. Furthermore, EMSA and super-shift assays indicated that the observed effects are dependent on the specific interactions between USF proteins and the ZNFO core promoter. From these results, it is concluded that USF1 and USF2 are essential for the basal transcription of the ZNFO gene.

摘要

ZNFO 是一种含有锌指结构域的 Krüppel 相关盒(KRAB)转录因子,它仅在牛卵母细胞中表达。先前的研究表明,ZNFO 具有内在的转录抑制活性,对于牛的早期胚胎发育至关重要。然而,调节 ZNFO 转录的机制仍不清楚。在本研究中,鉴定了控制 ZNFO 基础转录的核心启动子。克隆了 ZNFO 基因的 1.7kb 5'调控区,并通过荧光素酶报告基因检测证实了其启动子活性。一系列 ZNFO 启动子 5'缺失并进行荧光素酶报告基因检测表明,核心启动子区域必须包含转录起始位点上游 57bp 至 31bp 内的序列。序列分析表明,一个假定的 USF1/USF2 结合位点(GGTCACGTGACC)含有一个 E 盒基序(CACGTG),位于必需区域内。通过 RNAi 耗竭 USF1/USF2 和 E 盒突变分析表明,USF1/USF2 结合位点是 ZNFO 基础转录所必需的。此外,EMSA 和超级迁移分析表明,观察到的效应依赖于 USF 蛋白与 ZNFO 核心启动子之间的特异性相互作用。根据这些结果,可以得出结论,USF1 和 USF2 对于 ZNFO 基因的基础转录是必需的。

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